BAC Information

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BAC

Clone NameB6Ng01-327D23
Chromosome3 (Build37)5 (Build37)
Map Location 99,865,999 - 99,866,03121,807,462 - 21,807,614
singlet/doubletsingletsinglet
Overlap geneSpag17
Upstream geneLOC668557, Wars2, Tbx15, M6pr-ps, LOC623045
Downstream geneWdr3, Gdap2, LOC195514, 4930431B09Rik, OTTMUSG00000007026, Man1a2, Vtcn1, Trim45, Ttf2, Igsf2, Ptgfrn
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327D23.bB6Ng01-327D23.g
ACCGA114847GA114848
length931153
definitionB6Ng01-327D23.b B6Ng01-327D23.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(99,865,999 - 99,866,031)(21,807,462 - 21,807,614)
sequence
gaattctttgtttagctctgagccccattttttaaatggggttatttgat
tttctggagtccaccttcttgagttctttatatatatgttggatattagt
cccctatctgatttaggataggtaaagatcctttcccaatctgttggtgg
ccttttcgtcttattggcggtgtcttttgccttgccaaagctttgcaatt
ttatgaggtcccatttgtcaattcttgatcttacagcacaagccattgct
gttctattcaggaatttttcccctgtgcccatatctttgaggcttttccc
cactttctcctctataagtttcactgtctctggttttatgtggagttcct
tgatccacttagatttgaccttagaatactcaaggtacaagatacaattt
gaaaaacacatgaaactcaagaagaacgaagaccaaagtgtggacacttt
gccccttcttagaattgggaacaaaacacccatggaaggagttacagaga
caaagtttggagctgagacgaaaggatggacatctagagactgccatacc
cagggatccatcccataatcagcctccaaacgctgacaccattgcataca
caatttcagattttgctgaaaggaaccagatatagctgtctcttgtgagg
ctatgctggggcctagcaaacacagaagtggatgcttacagtcagctatt
ggatggattacagggcccccaatggaggagctagagaaagtacccaagga
gctaaaggggtctgcaaccctataggtggaacaccaatatgaactaacca
gtacccgccagaggtcgtatctctagctgcatatgtatcagaagatggcc
tagttggccatcagtggaaagagaggccattggtcttgcaaactttatat
gtctcagtacaggggaatgccagggccaaga

tccatgaaagtaaggcacaaacatttattgtggttcagtattgacggttc
aatccatcgtgatatgatgtggaagctacggcagagcagaacagttcatg
tcatgatgtccaggaagtgaagaagaagggaatataggaagaggtgaggg
ggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_99865999_99866031
seq2: B6Ng01-327D23.b_947_979 (reverse)

seq1  TCTTGGCCCTGGCATTCCCCTGTACTGGGACAT  33
      ||||||||||||||||||||||||||| |||||
seq2  TCTTGGCCCTGGCATTCCCCTGTACTGAGACAT  33


seq1: chr5_21807462_21807614
seq2: B6Ng01-327D23.g_72_224 (reverse)

seq1  CCCCCCTCACCTCTTCCTATATTCCCTTCTTCTTCACTTCCTGGACATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCTCACCTCTTCCTATATTCCCTTCTTCTTCACTTCCTGGACATCA  50

seq1  TGACATGAACTGTTCTGCTCTGCCGTAGCTTCCACATCATATCACGATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGAACTGTTCTGCTCTGCCGTAGCTTCCACATCATATCACGATGG  100

seq1  ATTGAACCGTCAATACTGAACCACAATAAATGTTTGTGCCTTACTTTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACCGTCAATACTGAACCACAATAAATGTTTGTGCCTTACTTTCAT  150

seq1  GGA  153
      |||
seq2  GGA  153


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