BAC Information

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BAC

Clone NameB6Ng01-327P19
Chromosome5 (Build37)
Map Location 55,986,148 - 55,986,954
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666377, LOC666380
Downstream geneEG666405
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327P19.bB6Ng01-327P19.g
ACCGA115369GA115370
length573811
definitionB6Ng01-327P19.b B6Ng01-327P19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tctcaatctctgacccataattgttcctgtctgaaagaattacaggaatg
gaaatggagaggagcctgaggaaaagaaggtccagtgagaggcccaaagt
aggatccagctcaaggggaggtcccaagacatgacactactactgaggct
atggagcgctcacaaaaaggcacctatcatgatggccctccgaaaaaccc
aacaagcagctgaaagagtcagatgcagatattcgtacccaaccaatgaa
cagaagcagctgatccctcttgttgaattagggaaggcagaaagaagttg
aggagaagggtaatcctgtagggaaaccatcagactcaattaacctggac
tctgagatctctcaaacactgggccaccaaacagacagcatacaccagct
gatatgaggtccccaacagacatacagtagaggacttcggagtctgtgct
cattcagagatgatgcacctaatcctcaagaggctggaggccccagggaa
tttagaggtcaagtggggtgtgggttggaggcatcctcgtggagacaggg
tgtagggaggtagtgtgggatgt

gaattctaagtaaacttattgaaaccatttggaagatttggaaatgaatt
tgatttttaaatttttgttcagggatcaaagagagggaaatgaaatacct
ttctttagaatacaacatgcttaatcccagcacttgggaggcagaggcag
gtggatctctgagttcgaggccagcctggtctacaaagtgagttccagga
cagccagggctatacagagaaaccctgtctcgaaagaaaaaaaaaaaaaa
aaagaatacaacatgctttcctaaaaatatatagtgttcaagatttgcag
cactgaaaacttgaaaagaaatcttctctgttcctgtacatctgagttgt
aaaaacagaaatggttattaaatatatgaataccttatgttactgtataa
tctaccaacactgagttgtgatcttgtcgaggcaaatgtgtctaagtata
taatgtttagaatcattgagactgctgttttcaatactattaaattaata
ttaatttgatatttttggttaaatatgccaacagacaaggtatagcatat
ttgtgtgcatttatgtttatgatagtgtgtgtgatggtttgtatatcctt
ggaccaggagtggaactatctgaaggtgtggccttgttggaacaggtgtg
acctggttggaatgggtgtgtcactgtgggtgtgggtataagatcctcac
tctagttgcctggaagtcagtctttacactgggcagcctttggatgaaga
catagaaactctcagctccttctgtgccatgcctgcctggatacttgcct
tgctcccactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_55986148_55986954
seq2: B6Ng01-327P19.g_69_879 (reverse)

seq1  AGGTGGGAGCATGGC-AGTATCCAGGCAGGCATGGCACAGAAGGAGCTGA  49
      | ||||||||| ||| ||||||||||||||||||||||||||||||||||
seq2  AAGTGGGAGCAAGGCAAGTATCCAGGCAGGCATGGCACAGAAGGAGCTGA  50

seq1  GAG-TTCTATGTCTTCATCCAAAGGCTG-CCAGTGT-AAGACTGACTTCC  96
      ||| |||||||||||||||||||||||| ||||||| |||||||||||||
seq2  GAGTTTCTATGTCTTCATCCAAAGGCTGCCCAGTGTAAAGACTGACTTCC  100

seq1  AGGCAACTAGGGTGAGGATCTTATACCCACACCCACAGTGACACACCCAT  146
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACTAGAGTGAGGATCTTATACCCACACCCACAGTGACACACCCAT  150

seq1  TCCAACCAGGTCACACCTGTTCCAACAAGGCCACACCTTCAGATAGTTCC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACCAGGTCACACCTGTTCCAACAAGGCCACACCTTCAGATAGTTCC  200

seq1  ACTCCTGGTCCAAGGATATACAAACCATCACACACACTATCATAAACATA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGGTCCAAGGATATACAAACCATCACACACACTATCATAAACATA  250

seq1  AATGCACACAAATATGCTATACCTTGTCTGTTGGCATATTTAACCAAAAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCACACAAATATGCTATACCTTGTCTGTTGGCATATTTAACCAAAAA  300

seq1  TATCAAATTAATATTAATTTAATAGTATTGAAAACAGCAGTCTCAATGAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAATTAATATTAATTTAATAGTATTGAAAACAGCAGTCTCAATGAT  350

seq1  TCTAAACATTATATACTTAGACACATTTGCCTCGACAAGATCACAACTCA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACATTATATACTTAGACACATTTGCCTCGACAAGATCACAACTCA  400

seq1  GTGTTGGTAGATTATACAGTAACATAAGGTATTCATATATTTAATAACCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGGTAGATTATACAGTAACATAAGGTATTCATATATTTAATAACCA  450

seq1  TTTCTGTTTTTACAACTCAGATGTACAGGAACAGAGAAGATTTCTTTTCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTTTTACAACTCAGATGTACAGGAACAGAGAAGATTTCTTTTCA  500

seq1  AGTTTTCAGTGCTGCAAATCTTGAACACTATATATTTTTAGGAAAGCATG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCAGTGCTGCAAATCTTGAACACTATATATTTTTAGGAAAGCATG  550

seq1  TTGTATTCTTTTTTTTTTTTTTTTTCTTTCGAGACAGGGTTTCTCTGTAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTCTTTTTTTTTTTTTTTTTCTTTCGAGACAGGGTTTCTCTGTAT  600

seq1  AGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACT  650

seq1  CAGAGATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAGCATGTTGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAGCATGTTGT  700

seq1  ATTCTAAAGAAAGGTATTTCATTTCCCTCTCTTTGATCCCTGAACAAAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAAGAAAGGTATTTCATTTCCCTCTCTTTGATCCCTGAACAAAAA  750

seq1  TTTAAAAATCAAATTCATTTCCAAATCTTCCAAATGGTTTCAATAAGTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAATCAAATTCATTTCCAAATCTTCCAAATGGTTTCAATAAGTTT  800

seq1  ACTTAGAATTC  807
      |||||||||||
seq2  ACTTAGAATTC  811


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