BAC Information

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BAC

Clone NameB6Ng01-328L02
Chromosome5 (Build37)
Map Location 71,186,489 - 71,187,631
singlet/doubletsinglet
Overlap geneGabrg1
Upstream genenone
Downstream geneGabra2, LOC635092, 4930503B16Rik, Gabra4, Gabrb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328L02.bB6Ng01-328L02.g
ACCGA115883GA115884
length1,13865
definitionB6Ng01-328L02.b B6Ng01-328L02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactaaatacagagttgagatggtatagaaaaagtgtctactaat
tatagccacttttggcacagagtgccaaagtagcatccatattgaaggag
gtaatggaagaagctgcttccatacctgactcatgaggatcttaaaaaac
attcattcattctttactctctgttttggtaagagtgttctgtgatgttg
ttgatactcatttttactaatcactatagagatgtttctatggtcctcat
ctattttgctttgtatgttgccattagggttttctcaggtagtcttcagg
gaatatatctaattttgcatattctatcaaaatacacatgaatagtctgc
atttaaattgttataaaatgataccatttataattaaatcttatccacca
aagtcttgtatctgatggtgactgaagttgtttgtgcctattaaacttcc
atgtaatgagatttacaataatatttgacaattgtttttctgccaggaag
aatatttttacatagtttctttaacgctacttgccatctccataataaaa
catgcaaagaactgttttgttttgtttcattggattctagttgagaaaag
gcaaaacatactcacaaagtagacatgagaggataggagtttaaagagac
gaatgcatatacttacagccaacgattgaactgaggtcaggacccatatg
gaagagttaggagaaggactgaaggagctgaaggggatggcaaccccata
aaaagaccaacagttggctaacctggacccctgggagctcccagagacta
agccaccaaccaaagagcatacacaggctgttctgtggctcctctctcat
gtgtagcagaggactgccttgtctggcctcagtgggagagtatgtacata
attctgtagagacttaatgccctagagaagaagatgaaggagggagacca
tctctggggcaaagaggagaggtaataggatgaagaattttgagattggg
gggacctgactagagggagatcatatttagatgtaataaattaaataatt
atttaaaaaaagttacagaggaccatctattcatgtttttccagaagaac
tgattatagaatgatggaggagaaagttcaccttgcag

cagggcagggaagcaggaatgtgtgggttggtgaacaggggagtggggaa
tgggataaggaccgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_71186489_71187631
seq2: B6Ng01-328L02.b_47_1184

seq1  GAATTCACTAAATACAGAGTTGAGATGGTATAGAAAAAGTGTCTACTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAAATACAGAGTTGAGATGGTATAGAAAAAGTGTCTACTAAT  50

seq1  TATAGCCACTTTTGGCACAGAGTGCCAAAGTAGCATCCATATTGAAGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCCACTTTTGGCACAGAGTGCCAAAGTAGCATCCATATTGAAGGAG  100

seq1  GTAATGGAAGAAGCTGCTTCCATACCTGACTCATGAGGATCTTAAAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGGAAGAAGCTGCTTCCATACCTGACTCATGAGGATCTTAAAAAAC  150

seq1  ATTCATTCATTCTTTACTCTCTGTTTTGGTAAGAGTGTTCTGTGATGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTCATTCTTTACTCTCTGTTTTGGTAAGAGTGTTCTGTGATGTTG  200

seq1  TTGATACTCATTTTTACTAATCACTATAGAGATGTTTCTATGGTCCTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATACTCATTTTTACTAATCACTATAGAGATGTTTCTATGGTCCTCAT  250

seq1  CTATTTTGCTTTGTATGTTGCCATTAGGGTTTTCTCAGGTAGTCTTCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTGCTTTGTATGTTGCCATTAGGGTTTTCTCAGGTAGTCTTCAGG  300

seq1  GAATATATCTAATTTTGCATATTCTATCAAAATACACATGAATAGTCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATATCTAATTTTGCATATTCTATCAAAATACACATGAATAGTCTGC  350

seq1  ATTTAAATTGTTATAAAATGATACCATTTATAATTAAATCTTATCCACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATTGTTATAAAATGATACCATTTATAATTAAATCTTATCCACCA  400

seq1  AAGTCTTGTATCTGATGGTGACTGAAGTTGTTTGTGCCTATTAAACTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTTGTATCTGATGGTGACTGAAGTTGTTTGTGCCTATTAAACTTCC  450

seq1  ATGTAATGAGATTTACAATAATATTTGACAATTGTTTTTCTGCCAGGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATGAGATTTACAATAATATTTGACAATTGTTTTTCTGCCAGGAAG  500

seq1  AATATTTTTACATAGTTTCTTTAACGCTACTTGCCATCTCCATAATAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTTACATAGTTTCTTTAACGCTACTTGCCATCTCCATAATAAAA  550

seq1  CATGCAAAGAACTGTTTTGTTTTGTTTCATTGGATTCTAGTTGAGAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAAAGAACTGTTTTGTTTTGTTTCATTGGATTCTAGTTGAGAAAAG  600

seq1  GCAAAACATACTCACAAAGTAGACATGAGAGGATAGGAGTTTAAAGAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACATACTCACAAAGTAGACATGAGAGGATAGGAGTTTAAAGAGAC  650

seq1  GAATGCATATACTTACAGCCAACGATTGAACTGAGGTCAGGACCCATATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCATATACTTACAGCCAACGATTGAACTGAGGTCAGGACCCATATG  700

seq1  GAAGAGTTAGGAGAAGGACTGAAGGAGCTGAAGGGGATGGCAACCCCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTTAGGAGAAGGACTGAAGGAGCTGAAGGGGATGGCAACCCCATA  750

seq1  AAAAGACCAACAGTTGGCTAACCTGGACCCCTGGGAGCTCCCAGAGACTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACCAACAGTTGGCTAACCTGGACCCCTGGGAGCTCCCAGAGACTA  800

seq1  AGCCACCAACCAAAGAGCATACACAGGCTGTTCTGTGGCTCCTCTCTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACCAACCAAAGAGCATACACAGGCTGTTCTGTGGCTCCTCTCTCAT  850

seq1  GTGTAGCAGAGGACTGCCTTGTCTGGCCTCAGTGGGAGAGTATGTACATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGCAGAGGACTGCCTTGTCTGGCCTCAGTGGGAGAGTATGTACATA  900

seq1  ATTCTGTAGAGACTTAATGCCCTAGAGAAGAAGGATGAAGGAGGGAGACC  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATTCTGTAGAGACTTAATGCCCTAGAGAAGAA-GATGAAGGAGGGAGACC  949

seq1  ATCTCTGGGGCAAAGAGGAGAGGTAATAGGATGAAGAATTTTGAGATTGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGGGGCAAAGAGGAGAGGTAATAGGATGAAGAATTTTGAGATTGG  999

seq1  GGGGACCTGACTAGAGGGAGATCAATATTTAGGATGTAAATAAATAAAAT  1050
      ||||||||||||||||||||||| ||||||| ||||| ||||||| ||||
seq2  GGGGACCTGACTAGAGGGAGATC-ATATTTA-GATGT-AATAAATTAAAT  1046

seq1  AATTAATTTAAAAAAAGTTACAGGAAGACCATCTA-TCATG-TCTTCCAG  1098
      |||| ||||||||||||||||| || ||||||||| ||||| | ||||||
seq2  AATT-ATTTAAAAAAAGTTACA-GAGGACCATCTATTCATGTTTTTCCAG  1094

seq1  AGAAACTGA-TATAGGAAATGAATGAGGAGAAAAGTCACCTTGCAG  1143
      |  |||||| |||||  |||||  |||||||||  |||||||||||
seq2  AAGAACTGATTATAG--AATGATGGAGGAGAAAGTTCACCTTGCAG  1138


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