BAC Information

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BAC

Clone NameB6Ng01-329C18
Chromosome5 (Build37)
Map Location 59,193,115 - 59,194,162
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041385
Downstream geneLOC100041396, LOC666499, EG625870, LOC100041425
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329C18.bB6Ng01-329C18.g
ACCGA116219GA116220
length1,2081,053
definitionB6Ng01-329C18.b B6Ng01-329C18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaaaaggaagagatgtcccatggtcatggattgtcagaattaa
ctcagtaaaatttgccatcctaccaaagacaatctacatattcaatgcaa
tccccattaaaatcccaacacaattcttcaaagacatggaaagggcaatt
ctcaaatacatatggaaaggcaaaaacccagaatagcaaaaacaattctt
ttttttaattttttattagatattttcttcatttacatttcaaatgctat
ccccaaatccccctataccctccctctgccctgctctccaatccacccac
tcctgcttcatggccctggcattcccctgtactgggacatatgatcttca
caattccaagggcatctcctcccattgatggccaactaggccatcctctg
atacatatgcaactagagacatagctttgagaggtactggttagttcata
ttgttgttcctcctataggtttgtagacccctgtagctccttgggtactt
ctctagctccttcattaggggccccgtgttctatccaataggtgactgtg
agcacccacttctgtatttgctaggcattagcatagactcacaagagaga
gctatgtcagggtcctgtaagcaaaatccttctgccatatgcaatagtat
ctggatttggtggttgcatatgggatgaacccccgggtggggcactctct
ggatggtctttccttctgtctcagctctaaactttgtctttgtaactcct
tgcatgggtattttgttccccattataagaaggagagaagtatctacact
ttggtcttccttcttcttgagtttcatgtgttttgcaaattgtatcttgg
tattctaagtttctgggctaatatccacttatcagtgagtgcatatcatg
tgtgttctttagtgactgggttaccttactcaggatgatatcctccagat
gcatccatttgcctaagaatttcataaattcattgtttttattgcacatt
cttacataaaaaaatttctagggtatcaccatacctgaccttagctttac
tatagatcatagtgacaaaaactgcatggtattgggtacagagaacagac
acattgggtcatggcaatagaaatggagaccagaaataacccacacactt
gcgacttggatcttgcatagagccgaaattatccatgccaaggataaggc
ccttttcc

gaattccacacagagggtgtaataaaataaacatttgtgtaattacatta
tctttaagactcttttacttagaaacaattgccatctatcacaccatcct
gccattcctttgtgtttggttttatgtgaaattccaatatatatgtggaa
taaattccttttaaaaaggaattgtgataaattaatgtctatcctgttgt
aaaggcaacagaaataggagaaaaccacaaagttaacttaaagttaaatg
gagatgattctgaaaggttacaatgaaataaaataaaattattttaataa
aaactgacaagcaaatgaagaccttggtgagtaggaattggtatacatag
atataattatactttaatcttttctgtgactaattactaacgtaacaatt
gaaatgcatctttattctgtatcagtgtgtctttctgaacaaaggagaac
atagaaattctattattgtcccttgctagatatactattttttgtttctt
aactatcaaaggtttcaattttctaccagattcattgtgtggttcaaacc
atgtctcagtatatctgttgtccatagtaggagatctaacataacaaaat
aaaatatgaaaataatatacatgagttaaagagatgacagttaaaagcat
ttactgcttttcttcttttcttttcttttcttttctttctttctttcttt
ttttttttttttctttttttttttttgagacagggtttctctgtgtagct
ctggctgtcctggaactcactttgtagaccaggctgggcccaaactcaga
aatcggcctgcctaccaagtgctgggattaaaggcgtattccaccacaca
cgtcctactgttcttcttgattggctgctgaacattttatgtttgaaatt
ctttgtctccaggtcccacagattccaccacattgattcttgcttctgta
gattcttgtgacacacaacacacatacatacatacacacatattatttgt
cacatgccatgttcagctcacacatattgcacattgacttccacacacag
ata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_59193115_59194162
seq2: B6Ng01-329C18.g_64_1116 (reverse)

seq1  TATCTGTGTGTGGATGTCCATGTGC-ATATGTGTGAGCCTGACCAT-GCA  48
      |||||||||||||| ||| |||||| ||||||||||| |||| ||| |||
seq2  TATCTGTGTGTGGAAGTCAATGTGCAATATGTGTGAG-CTGAACATGGCA  49

seq1  TGTGACAA--TATATGTGTGTATGTATGTATGTGTGTTTGTGTGTTCAC-  95
      ||||||||   ||||||||||||||||||||||||| ||||||| |||| 
seq2  TGTGACAAATAATATGTGTGTATGTATGTATGTGTG-TTGTGTG-TCACA  97

seq1  AGATCCTACAGAAGCAAG-ATCAATGTGGTGG-ATCTGTTGGACCTGGAG  143
      |||  ||||||||||||| ||||||||||||| |||||| ||||||||||
seq2  AGAATCTACAGAAGCAAGAATCAATGTGGTGGAATCTGTGGGACCTGGAG  147

seq1  ACAAAGAATTTCAAACAT-AGATGTTCAGCAGCCAATCAAGAAGAACAGT  192
      |||||||||||||||||| | |||||||||||||||||||||||||||||
seq2  ACAAAGAATTTCAAACATAAAATGTTCAGCAGCCAATCAAGAAGAACAGT  197

seq1  AGGACGTGTGTGGTGGAATACGCCTTTAATCCCAGCACTTGGTAGGCAGG  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACGTGTGTGGTGGAATACGCCTTTAATCCCAGCACTTGGTAGGCAGG  247

seq1  CCGATTTCTGAGTTTGGGCCCAGCCTGGTCTACAAAGTGAGTTCCAGGAC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGATTTCTGAGTTTGGGCCCAGCCTGGTCTACAAAGTGAGTTCCAGGAC  297

seq1  AGCCAGAGCTACACAGAGAAACCCTGTCTCAAAAAAAAAAAAAGAAAAAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAGCTACACAGAGAAACCCTGTCTCAAAAAAAAAAAAAGAAAAAA  347

seq1  AAAAAAAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAGAAAAG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAGAAAAG  397

seq1  CAGTAAATGCTTTTAACTGTCATCTCTTTAACTCATGTATATTATTTTCA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAATGCTTTTAACTGTCATCTCTTTAACTCATGTATATTATTTTCA  447

seq1  TATTTTATTTTGTTATGTTAGATCTCCTACTATGGACAACAGATATACTG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATTTTGTTATGTTAGATCTCCTACTATGGACAACAGATATACTG  497

seq1  AGACATGGTTTGAACCACACAATGAATCTGGTAGAAAATTGAAACCTTTG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGGTTTGAACCACACAATGAATCTGGTAGAAAATTGAAACCTTTG  547

seq1  ATAGTTAAGAAACAAAAAATAGTATATCTAGCAAGGGACAATAATAGAAT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTAAGAAACAAAAAATAGTATATCTAGCAAGGGACAATAATAGAAT  597

seq1  TTCTATGTTCTCCTTTGTTCAGAAAGACACACTGATACAGAATAAAGATG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGTTCTCCTTTGTTCAGAAAGACACACTGATACAGAATAAAGATG  647

seq1  CATTTCAATTGTTACGTTAGTAATTAGTCACAGAAAAGATTAAAGTATAA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCAATTGTTACGTTAGTAATTAGTCACAGAAAAGATTAAAGTATAA  697

seq1  TTATATCTATGTATACCAATTCCTACTCACCAAGGTCTTCATTTGCTTGT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCTATGTATACCAATTCCTACTCACCAAGGTCTTCATTTGCTTGT  747

seq1  CAGTTTTTATTAAAATAATTTTATTTTATTTCATTGTAACCTTTCAGAAT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTTATTAAAATAATTTTATTTTATTTCATTGTAACCTTTCAGAAT  797

seq1  CATCTCCATTTAACTTTAAGTTAACTTTGTGGTTTTCTCCTATTTCTGTT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCCATTTAACTTTAAGTTAACTTTGTGGTTTTCTCCTATTTCTGTT  847

seq1  GCCTTTACAACAGGATAGACATTAATTTATCACAATTCCTTTTTAAAAGG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTACAACAGGATAGACATTAATTTATCACAATTCCTTTTTAAAAGG  897

seq1  AATTTATTCCACATATATATTGGAATTTCACATAAAACCAAACACAAAGG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTCCACATATATATTGGAATTTCACATAAAACCAAACACAAAGG  947

seq1  AATGGCAGGATGGTGTGATAGATGGCAATTGTTTCTAAGTAAAAGAGTCT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCAGGATGGTGTGATAGATGGCAATTGTTTCTAAGTAAAAGAGTCT  997

seq1  TAAAGATAATGTAATTACACAAATGTTTATTTTATTACACCCTCTGTGTG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATAATGTAATTACACAAATGTTTATTTTATTACACCCTCTGTGTG  1047

seq1  GAATTC  1048
      ||||||
seq2  GAATTC  1053


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