BAC Information

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BAC

Clone NameB6Ng01-329H19
Chromosome5 (Build37)
Map Location 59,816,404 - 59,817,542
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041385, LOC100041396, LOC666499, EG625870, LOC100041425
Downstream geneLOC546866, Cbfa2t2-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329H19.bB6Ng01-329H19.g
ACCGA116437GA116438
length1,135963
definitionB6Ng01-329H19.b B6Ng01-329H19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatcttgccaactttttgcttgaattagattgaatagtatattt
atatgattaatgataatattattaagtttatttcttgctactgtaaaatg
acagtggtccttaactatgttttggtataaactataaaattggaataaat
gtgttacataagtgaaataaaaatgcaaagtcaaaattaaaaaataaaag
tgatgtagactttacctttgttcgataagattgtgacttaaaatgtgtta
aatggatgctatacattaattcattgatgcaaaagaatgattttaaagct
ttattttttaaatgttaaaattagaaaacacatttaaaacttaatcttct
aaaaccaggcaagaattttggataaattaaagaaacattaaatataaaat
attacatcaatgaaaatagactatgatggtcagattttgcctaataccag
aatgtcagttattatggcaggaatcagatcaaaataccaatggtcaatga
aattatataacagaaaaacacaaactaaatatttcatagattacatattt
agtatatctgtattattgagttgtaaccatatcagtaaggtaagaaatct
tgacagagatacagaaatgttgtgattattgtaattatctgttaaactgt
gggattaagagaagcttcatttctactacatatttctaagacatataatg
tcttcaattgggtgataatttaactcacaagatatgtattaaacaaaatc
tgcttgaagtttggtgacaattttatacattaaatgctactgatacttct
atttaatatttaaacaaggtgaaaaatagaacatcttagtgttagaaaat
ataaaatatttaggaaaatttataacttatggatttatacattgtcatat
gtgcttacagggtaaaattatgtgctattttcttaaagatgttgtcttaa
tttagtctttttctgtataataaaagtctatgtcttttttggagatataa
ttttcatcatgtaattaaatattatagcaaatataagaccattataaaaa
atttatagaaacatggacatccattcactattgaaacaaccttgtgatct
gccttaggccatcaagcatgtcattctttaaaaca

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaactaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggattgtgaggagccgccctcacat
ttgccattataagatggcgctgacagctgtgttctaagtagtaaataatc
tgcacacgtgcaggggcagttttcccgccacgtgttctgcctttctcatg
atgacaactgagccgatgggctgcagccaatcagggagtgacatgtccta
ggcggaggataattctccttaaaagggatggggtttcgccattctctctc
ttgctctggctcttgctctcttgctcctgaagatgtaagcaatagagctc
ttgctcttgctctcttgctcctgaagatgtaagcaataaagcttttgcag
cagaagattccggtttgttgagttcttcctggccggtcgtgagaatgcgt
gtaagagaggatccagtaactttttcttttaatggatattttctttcttt
acatttccaacgatattccctttccgggtttccctccagaaaacccccta
tactgcttcttttccccctccttctgagagtgctcctccaccaatccacc
cactcctgcctctattttggatttttcttaattataaaaatatacaaatt
ttaaaacttcaagtgttcgtgtgtgtgtgtgtgtgttagactagagtggg
tattgtttgaagtcaagcattaaaaacatttaaatttgtctcatcttaat
aatttttcaagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_59816404_59817542
seq2: B6Ng01-329H19.b_45_1179

seq1  GAATTCAATCTTGCCAACTTTTTGCTTGAATTAGATTGAATAGTATATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCTTGCCAACTTTTTGCTTGAATTAGATTGAATAGTATATTT  50

seq1  ATATGATTAATGATAATATTATTAAGTTTATTTCTTGCTACTGTAAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATTAATGATAATATTATTAAGTTTATTTCTTGCTACTGTAAAATG  100

seq1  ACAGTGGTCCTTAACTATGTTTTGGTATAAACTATAAAATTGGAATAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGTCCTTAACTATGTTTTGGTATAAACTATAAAATTGGAATAAAT  150

seq1  GTGTTACATAAGTGAAATAAAAATGCAAAGTCAAAATTAAAAAATAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTACATAAGTGAAATAAAAATGCAAAGTCAAAATTAAAAAATAAAAG  200

seq1  TGATGTAGACTTTACCTTTGTTCGATAAGATTGTGACTTAAAATGTGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTAGACTTTACCTTTGTTCGATAAGATTGTGACTTAAAATGTGTTA  250

seq1  AATGGATGCTATACATTAATTCATTGATGCAAAAGAATGATTTTAAAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATGCTATACATTAATTCATTGATGCAAAAGAATGATTTTAAAGCT  300

seq1  TTATTTTTTAAATGTTAAAATTAGAAAACACATTTAAAACTTAATCTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTAAATGTTAAAATTAGAAAACACATTTAAAACTTAATCTTCT  350

seq1  AAAACCAGGCAAGAATTTTGGATAAATTAAAGAAACATTAAATATAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAGGCAAGAATTTTGGATAAATTAAAGAAACATTAAATATAAAAT  400

seq1  ATTACATCAATGAAAATAGACTATGATGGTCAGATTTTGCCTAATACCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATCAATGAAAATAGACTATGATGGTCAGATTTTGCCTAATACCAG  450

seq1  AATGTCAGTTATTATGGCAGGAATCAGATCAAAATACCAATGGTCAATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCAGTTATTATGGCAGGAATCAGATCAAAATACCAATGGTCAATGA  500

seq1  AATTATATAACAGAAAAACACAAACTAAATATTTCATAGATTACATATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATATAACAGAAAAACACAAACTAAATATTTCATAGATTACATATTT  550

seq1  AGTATATCTGTATTATTGAGTTGTAACCATATCAGTAAGGTAAGAAATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATCTGTATTATTGAGTTGTAACCATATCAGTAAGGTAAGAAATCT  600

seq1  TGACAGAGATACAGAAATGTTGTGATTATTGTAATTATCTGTTAAACTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGAGATACAGAAATGTTGTGATTATTGTAATTATCTGTTAAACTGT  650

seq1  GGGATTAAGAGAAGCTTCATTTCTACTACATATTTCTAAGACATATAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTAAGAGAAGCTTCATTTCTACTACATATTTCTAAGACATATAATG  700

seq1  TCTTCAATTGGGTGATAATTTAACTCACAAGATATGTATTAAACAAAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAATTGGGTGATAATTTAACTCACAAGATATGTATTAAACAAAATC  750

seq1  TGCTTGAAGTTTGGTGACAATTTTATACATTAAATGCTACTGATACTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGAAGTTTGGTGACAATTTTATACATTAAATGCTACTGATACTTCT  800

seq1  ATTTAATATTTAAACAAGGTGAAAAATAGAACATCTTAGTGTTAGAAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATATTTAAACAAGGTGAAAAATAGAACATCTTAGTGTTAGAAAAT  850

seq1  ATAAAATATTTAGGAAAATTTATAACTTATGGATTTATACATTGTCATAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATATTTAGGAAAATTTATAACTTATGGATTTATACATTGTCATAT  900

seq1  GTGCTTACAGGGTAAAATTATGTGCTATTTTCTTAAAGATGTTGTCTTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTACAGGGTAAAATTATGTGCTATTTTCTTAAAGATGTTGTCTTAA  950

seq1  TTTAGTCTTTTTCTGTATAATAAAAGTCTATGTC-TTTTTGGAGATATAA  999
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTTAGTCTTTTTCTGTATAATAAAAGTCTATGTCTTTTTTGGAGATATAA  1000

seq1  TTTTCATCATGTAATTAAATATTATAAGCAAATAATAAAGACCATTAT-A  1048
      ||||||||||||||||||||||||| ||||||||   ||||||||||| |
seq2  TTTTCATCATGTAATTAAATATTAT-AGCAAATA--TAAGACCATTATAA  1047

seq1  AAAATTTATAGGAAACATGGACATCCATTCACTATTGAAACAAACTTGTT  1098
      |||||||||| |||||||||||||||||||||||||||||||| |||| |
seq2  AAAATTTATA-GAAACATGGACATCCATTCACTATTGAAACAACCTTG-T  1095

seq1  GATCTG-CTTAGGGCATCACAGCATGTCATTTCCTTAAAACA  1139
      |||||| |||||| ||||| ||||||||| ||| ||||||||
seq2  GATCTGCCTTAGGCCATCA-AGCATGTCA-TTCTTTAAAACA  1135


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