BAC Information

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BAC

Clone NameB6Ng01-329I07
Chromosome5 (Build37)
Map Location 5,957,100 - 5,958,184
singlet/doubletsinglet
Overlap genenone
Upstream genePftk1, 1700015F17Rik, Cldn12, Gtpbp10, LOC667699, EG667705, A330021E22Rik, Steap2, Steap1, LOC727711, LOC546854
Downstream geneLOC100041208, EG435830
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329I07.bB6Ng01-329I07.g
ACCGA116459GA116460
length1,1481,071
definitionB6Ng01-329I07.b B6Ng01-329I07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattctttttaatagctgagtagtactccattgtgtaaatgtacc
acattttctgtatccattcttctgttgaggggcatctgggttctttccag
cttctggctattataaataaggctgctatgaacatagtggagcatgtgtc
cttcttaacggttgggacatcttctggatatatgaccaggagaggtattg
tgggatcctgggtagtactatgtccaatattctgagaaaccgccagactg
atttccagagtggttgtacaagattgcaatcccaccaacaatggaggaga
gttcctctttctccacatcctcgccagcatctgctgtcacctgaattttt
gacgttagccattctgactagtgtgaggtagaatctcagggttgttttga
tttgcatttcctggatgattaaggatgttgaacattttttcaggtgcttc
tctgctattcggtattcctcaggtgagaattatttgttcagctctaaacc
ccattttttttccattttttattaggtatttagctcatttacatttccaa
tgctataccaaaagtcccccatacccacccacccccactcccttacccgc
ccactccccctttttggccctggctttcccctgtactggggcatataaag
tttgcgtgtccaatgggcctctctttccagtgatggccgactaggccatc
ttttgatacatatgcagctagagtcaagagctccggggtactggttagtt
cataatgttgaactactcagctattaaaaagaatgaatttatgaaattcc
tagcccaaatggatggacctggagggcatcatcctgagtgaggtaacaca
tttcacaaaaggaactcacacaatatgtactcactgataagtggatatta
gcccaaaacctaggatacccaagatataagaatacaattttctaaacaca
tgaaacttcaagaaaaattgaagactggaagtgtggacactatgccccct
cattagaagtgggcaacaaaatcacccttggaacggagtacacgagaaca
aagttggaagctgcagaatgtataggaatggaccattgttagaaacttgc
cattattcaagggggattcctaccgcacataataccagcgcactcaaa

gaattcaggacctctgcttgttcaggtcccgttctctccggtcagccctg
ctcactcaggccaaagattgattgattgattgatgttgtcatcagattat
tttaattaggtattttactttattttttatttaattttttattagctatg
gatgctcacaatcatctattgtatggaacacagggcccccaaagatttat
ttattattatatctaagaacactgtagctatcttcagacacaccagaaga
ggatgtcagatcacattatggatagttgtgagcaaccatgtggttgctgg
aatttgaactcaggaccttctgaagaacagtcagtgctcttaaccactga
gccatctcgccagtcctaaaaatattttttccccaaataatctgatcaat
aactcttgcatctcccagaatgagacttccctaaaaattcagtgtttttc
tcagtgatactgcttttctgcatttgttctctagggtttcaggtcccggt
tctgttgtcaaaatgcttggatgtatgagtgttgtttcatccctgcatct
gtttattggacttcacaacagttacagagaacttagttatagcattcttc
ccaattaaaatatggaagttaatccaaagagttttggctccatacatgaa
atccatgaccaactcacacaggacctcataattaggtttggacatgggca
gtttaccaaagttacttaaaattgctcacaagagattgtataattcaaga
taataactcttgaccataaatgattttggaatgcttttagttcaaatgca
tttgatattaatcaatttggtttacctcagtcttcaaaagattcaaaatt
aataaaattttcctttactttatatttcatgtactttatattctctcatt
actttatattttgcaaaatacaaaataatgtaataaagaaattcagtgtg
acatgcgctcagttaaaagttgtatattttaattaaatgctaatcagaga
tgcctagtcgcatcactggaagaagagcccattgacttgcaactttatat
gctcagtacagggacaccagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_5957100_5958184
seq2: B6Ng01-329I07.g_65_1135

seq1  GAATTCAGGACCTCTGCTTGTTCAGGTCCCGTTCTCTCCGGTCAGCCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGACCTCTGCTTGTTCAGGTCCCGTTCTCTCCGGTCAGCCCTG  50

seq1  CTCACTCAGGCCAAAGATTGATTGATTGATTGATGTTGTCATCAGATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCAGGCCAAAGATTGATTGATTGATTGATGTTGTCATCAGATTAT  100

seq1  TTTAATTAGGTATTTTACTTTATTTTTTATTTAATTTTTTATTAGCTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTAGGTATTTTACTTTATTTTTTATTTAATTTTTTATTAGCTATG  150

seq1  GATGCTCACAATCATCTATTGTATGGAACACAGGGCCCCCAAAGATTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTCACAATCATCTATTGTATGGAACACAGGGCCCCCAAAGATTTAT  200

seq1  TTATTATTATATCTAAGAACACTGTAGCTATCTTCAGACACACCAGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTATATCTAAGAACACTGTAGCTATCTTCAGACACACCAGAAGA  250

seq1  GGATGTCAGATCACATTATGGATAGTTGTGAGCAACCATGTGGTTGCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTCAGATCACATTATGGATAGTTGTGAGCAACCATGTGGTTGCTGG  300

seq1  AATTTGAACTCAGGACCTTCTGAAGAACAGTCAGTGCTCTTAACCACTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGAACTCAGGACCTTCTGAAGAACAGTCAGTGCTCTTAACCACTGA  350

seq1  GCCATCTCGCCAGTCCTAAAAATATTTTTTCCCCAAATAATCTGATCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCTCGCCAGTCCTAAAAATATTTTTTCCCCAAATAATCTGATCAAT  400

seq1  AACTCTTGCATCTCCCAGAATGAGACTTCCCTAAAAATTCAGTGTTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTGCATCTCCCAGAATGAGACTTCCCTAAAAATTCAGTGTTTTTC  450

seq1  TCAGTGATACTGCTTTTCTGCATTTGTTCTCTAGGGTTTCAGGTCCCGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGATACTGCTTTTCTGCATTTGTTCTCTAGGGTTTCAGGTCCCGGT  500

seq1  TCTGTTGTCAAAATGCTTGGATGTATGAGTGTTGTTTCATCCCTGCATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGTCAAAATGCTTGGATGTATGAGTGTTGTTTCATCCCTGCATCT  550

seq1  GTTTATTGGACTTCACAACAGTTACAGAGAACTTAGTTATAGCATTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTGGACTTCACAACAGTTACAGAGAACTTAGTTATAGCATTCTTC  600

seq1  CCAATTAAAATATGGAAGTTAATCCAAAGAGTTTTGGCTCCATACATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTAAAATATGGAAGTTAATCCAAAGAGTTTTGGCTCCATACATGAA  650

seq1  ATCCATGACCAACTCACACAGGACCTCATAATTAGGTTTGGACATGGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGACCAACTCACACAGGACCTCATAATTAGGTTTGGACATGGGCA  700

seq1  GTTTACCAAAGTTACTTAAAATTGCTCACAAGAGATTGTATAATTCAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACCAAAGTTACTTAAAATTGCTCACAAGAGATTGTATAATTCAAGA  750

seq1  TAATAACTCTTGACCATAAATGATTTTGGAATGCTTTTAGTTCAAATGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACTCTTGACCATAAATGATTTTGGAATGCTTTTAGTTCAAATGCA  800

seq1  TTTGATATTAATCAATTTGGTTTACCTCAGTCTTCAAAAGATTCAAAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATATTAATCAATTTGGTTTACCTCAGTCTTCAAAAGATTCAAAATT  850

seq1  AATAAAATTTTCCTTTACTTTATATTTCATGTACTTTATATTCTCTCATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATTTTCCTTTACTTTATATTTCATGTACTTTATATTCTCTCATT  900

seq1  ACTTTATATTTTGCAAAATACAAAATAATGTAAATAAAGAAATTCAGGTG  950
      ||||||||||||||||||||||||||||||| |||||||||||||| |||
seq2  ACTTTATATTTTGCAAAATACAAAATAATGT-AATAAAGAAATTCA-GTG  948

seq1  TGACATGCGCTCAGTTAAAAGGTTGTATATTTTAATTAAAATGCTAATCA  1000
      |||||||||||||||||||| |||||||||||||||| ||||||||||||
seq2  TGACATGCGCTCAGTTAAAA-GTTGTATATTTTAATT-AAATGCTAATCA  996

seq1  GAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGC  1050
      | |||| |||||||||  |||||||||||  ||| ||||||| |||||||
seq2  G-AGAT-GCCTAGTCG--CATCACTGGAAGAAGA-GCCCATT-GACTTGC  1040

seq1  AAACTTTATATGCCTCAGTACAGGGGAACACCAGG  1085
       ||||||||||| ||||||||||||  ||||||||
seq2  -AACTTTATATG-CTCAGTACAGGG--ACACCAGG  1071


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