BAC Information

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BAC

Clone NameB6Ng01-330C24
Chromosome5 (Build37)
Map Location 103,631,862 - 103,632,458
singlet/doubletsinglet
Overlap geneMapk10
Upstream geneLOC625780, Arhgap24, LOC666563
Downstream gene4930429D17Rik, LOC100041039, 1700021F02Rik, LOC100041049, Ptpn13, Slc10a6, 1700016H13Rik, Aff1, Klhl8, Hsd17b13, EG666629, Hsd17b11, Nudt9, Sparcl1, LOC100041136, Dspp, Dmp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330C24.b
ACCGA116939
length591
definitionB6Ng01-330C24.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ttactgtgtaataagcactataccgaacactttaaaaatattaatcttca
gtcatctctgtggtttacagaccaggggaggaaggcagagtttaggagtc
aaaaacttaagatagatgcgcagtgaagaagcaatggacttagtgctcaa
cactaagctttcctgacctgcaaattctttagtttctcagagtttgttca
ggggcagattaggctgaggctagagggaactctgaaagggatgctgcagg
agcaaaaataccgagagcgtaaagcaaagaatggctggccgtggttacac
accaaaggagtggccctgaagatgagtgtcattcaggggtgaagaaggta
gggatgggaaatgttgcgggtttccgtatctgtaggctaggcagatccca
tatcagccatatatatagatttatagtcttataatcttagagtctttata
gatttatagttagagcctctaatcatatatcttatgattgtgatatttaa
taagaaattaatgaaagcctgtagggttttaaagtttaagattaaaaaga
gaccacagtgtttattttggctaattctttactttctaaag
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_103631862_103632458
seq2: B6Ng01-330C24.b_43_639 (reverse)

seq1  CTTTAGAAAGTAAAGAATTAGCCTAAATAAACACTGTGGTCTCTTTTTAA  50
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTTTAGAAAGTAAAGAATTAGCCAAAATAAACACTGTGGTCTCTTTTTAA  50

seq1  TCTTAAACTTTAAAACCCTACAGGCTTTCATTAATTTCTTATTAAATATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAACTTTAAAACCCTACAGGCTTTCATTAATTTCTTATTAAATATC  100

seq1  ACAATCATAAGATATATGATTAGAGGCTCTAACTATAAATCTATAAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCATAAGATATATGATTAGAGGCTCTAACTATAAATCTATAAAGAC  150

seq1  TCTAAGATTATAAGACTATAAATCTATATATATGGCTGATATGGGATCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGATTATAAGACTATAAATCTATATATATGGCTGATATGGGATCTG  200

seq1  CCTAGCCTACAGATACGGAAACCCGCAACATTTCCCATCCCTACCTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCCTACAGATACGGAAACCCGCAACATTTCCCATCCCTACCTTCTT  250

seq1  CACCCCTGAATGACACTCATCTTCAGGGCCACTCCTTTGGTGTGTAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTGAATGACACTCATCTTCAGGGCCACTCCTTTGGTGTGTAACCA  300

seq1  CGGCCAGCCATTCTTTGCTTTACGCTCTCGGTATTTTTGCTCCTGCAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCAGCCATTCTTTGCTTTACGCTCTCGGTATTTTTGCTCCTGCAGCA  350

seq1  TCCCTTTCAGAGTTCCCTCTAGCCTCAGCCTAATCTGCCCCTGAACAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTCAGAGTTCCCTCTAGCCTCAGCCTAATCTGCCCCTGAACAAAC  400

seq1  TCTGAGAAACTAAAGAATTTGCAGGTCAGGAAAGCTTAGTGTTGAGCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAAACTAAAGAATTTGCAGGTCAGGAAAGCTTAGTGTTGAGCACT  450

seq1  AAGTCCATTGCTTCTTCACTGCGCATCTATCTTAAGTTTTTGACTCCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCATTGCTTCTTCACTGCGCATCTATCTTAAGTTTTTGACTCCTAA  500

seq1  ACTCTGCCTTCCTCCCCTGGTCTGTAAACCACAGAGATGACTGAAGATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCCTTCCTCCCCTGGTCTGTAAACCACAGAGATGACTGAAGATTA  550

seq1  ATATTTTTAAAGTGTTCGGTATAGTGCTTATTACACAGTAAGAATTC  597
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTAAAGTGTTCGGTATAGTGCTTATTACACAGTAAGAATTC  597