BAC Information

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BAC

Clone NameB6Ng01-331D22
Chromosome5 (Build37)
Map Location 105,205,754 - 105,366,179
singlet/doubletdoublet
Overlap geneLOC666726, C230055K05Rik, LOC100041216, Abcg3
Upstream geneAff1, Klhl8, Hsd17b13, EG666629, Hsd17b11, Nudt9, Sparcl1, LOC100041136, Dspp, Dmp1, LOC100041145, Ibsp, Mepe, Spp1, Pkd2, BC005561, LOC100042165, LOC100041172, D930016D06Rik, 2310012P17Rik, LOC640963, LOC100041199
Downstream geneLOC626471, EG545790, 5830443L24Rik, BC057170, Gbp4, LOC675363, LOC626578, Mpa2l, EG634650, Lrrc8b, Lrrc8c, Lrrc8d, LOC100042335, D830014E11Rik, LOC100042349, Zfp326
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331D22.bB6Ng01-331D22.g
ACCGA117669GA117670
length1,1211,128
definitionB6Ng01-331D22.b B6Ng01-331D22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(105,205,754 - 105,206,882)(105,365,041 - 105,366,179)
sequence
gaattccagactactatggcaaaaagcaatgaactttttacaaccttcag
gcaggaaatggaaaagatgacaaagaaaattaaaaaactggaaaaagaaa
caataatatggcgtaccaaatgggaaaacaataataaagcacttctgcag
atggccgaagagaaaactgtccgtgataaagagtacaaggcttttcaaat
aaaactggaacggttagagaagctgtgcagggctctacagacagagagaa
atgagctcaacgagaaggtcggtcgaagtcctgaaagagcaggtctctat
caaagcagcagatggggacttggtgtcacctgcaacgcagccctgtgctg
tcctggattccttcaaagagacttcaagaagaaccctgggaatgcacttg
gaggctagagccaagtcagtgtgtgagaaaagtgctgtacaaaagccctc
atcttcaggttctcctgctcaaggcattgagtcagttgactagggtgaag
tatgatcactgtattgagagatatattttgtgtataacttcctgttagta
gtaactattggttttgtggtgaagattttcttactttttctaccatatct
gtattttcttagaactactggacttatgtggtacaggaggctgcttagca
gtttggaatagttttactctataaatttccctcaactatgttgcacatct
gcctcattttccccctttggagtgcatgccttcagcacataattttcata
actaaaaaacaaggccattagaggaattatattctcccaacggttccttg
atgtgaaaacaatatcccactaatattagtgaaaggaaaatacctttaat
aacccatttaaatacgggattagaattcgggaactggtcagaaacatttt
tcatttgaatcagcttttcttgattcacttgacaaagtaaaataaccttt
gaagttctgacaaaactaacttaagtactcattaagtagtcctaatatat
tgatttgaggatagatgacattaaaacgtgattattccttgaaagtgctt
tttgcagttcaagcaaaacataaagctcccttcctcacatacattctggc
ttgttgaaagtttgtgtcatt
gaattctttgcagcagctcctttcctaaccagtgtaaggcccactgaatg
cagctgggctcccactggtaccacaggttcagtttgtcaccagtgctgct
ggggacatcctgtagctgagcagctgtggttgtcacttcaggcttagtac
aggaatagactcccagctgaaacttttttttttttttggagtattgttgg
ctttattttttctattagatattttctttatttacatttcaaatgttatc
ccctttcctagtttcccctccaaaaatcacctatccccttccttctcccc
ctgctccccaacacacccagtcccattccttgtcctggcattcccctatg
ttggggtgtagcgccttcccaggaccaagggcctctcttcccattgatga
ccaaaaaatatagaatgcttcatgaatttgcgtgtcattcttgcacagtg
gccatgctaatcttctctgtatcattccaattttactatatgtgctgttg
aagcgagcactagctgaaactcttaatttcctttggttccaggtctagaa
ttctatgcatctgttcttgtgcatgactgtctcctgggtcaggaaaatgc
tgacagagcttagatctctttggaatgcttgtgtcattaggaagctggag
ttttctgctttgggagtaacaacaatacttgaaacatgcttttgcctgtt
gaagagagcagcattatagattcagaaaggaatgacaccgtgaagtctac
agagttggatcatagtgtgactctgtaaactccccaagtttattaggcct
tcatcctgtatgcttttaagtggatatggcagctacacttctctgggata
gtttttgaaattaacaatggtgactgcctcacatagattcagatgattgg
gcataatacataacaaaattgtaagcacatcatgactactgtgattcaga
taaagggagaatttttaatgatatgttgagatataagtttttaagggagc
aacagtgaatctactaatacttggacattacttggtgtatgttgaattaa
cagaatgtactggtgagattctggatgatccaggaatgaatctctcatcg
ggggcttcagggaatcacctgcttagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_105205754_105206882
seq2: B6Ng01-331D22.b_47_1167

seq1  GAATTCCAGACTACTATGGCAAAAAGCAATGAACTTTTTACAACCTTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGACTACTATGGCAAAAAGCAATGAACTTTTTACAACCTTCAG  50

seq1  GCAGGAAATGGAAAAGATGACAAAGAAAATTAAAAAACTGGAAAAAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAATGGAAAAGATGACAAAGAAAATTAAAAAACTGGAAAAAGAAA  100

seq1  CAATAATATGGCGTACCAAATGGGAAAACAATAATAAAGCACTTCTGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATATGGCGTACCAAATGGGAAAACAATAATAAAGCACTTCTGCAG  150

seq1  ATGGCCGAAGAGAAAACTGTCCGTGATAAAGAGTACAAGGCTTTTCAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCGAAGAGAAAACTGTCCGTGATAAAGAGTACAAGGCTTTTCAAAT  200

seq1  AAAACTGGAACGGTTAGAGAAGCTGTGCAGGGCTCTACAGACAGAGAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGGAACGGTTAGAGAAGCTGTGCAGGGCTCTACAGACAGAGAGAA  250

seq1  ATGAGCTCAACGAGAAGGTCGGTCGAAGTCCTGAAAGAGCAGGTCTCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTCAACGAGAAGGTCGGTCGAAGTCCTGAAAGAGCAGGTCTCTAT  300

seq1  CAAAGCAGCAGATGGGGACTTGGTGTCACCTGCAACGCAGCCCTGTGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAGCAGATGGGGACTTGGTGTCACCTGCAACGCAGCCCTGTGCTG  350

seq1  TCCTGGATTCCTTCAAAGAGACTTCAAGAAGAACCCTGGGAATGCACTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGATTCCTTCAAAGAGACTTCAAGAAGAACCCTGGGAATGCACTTG  400

seq1  GAGGCTAGAGCCAAGTCAGTGTGTGAGAAAAGTGCTGTACAAAAGCCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTAGAGCCAAGTCAGTGTGTGAGAAAAGTGCTGTACAAAAGCCCTC  450

seq1  ATCTTCAGGTTCTCCTGCTCAAGGCATTGAGTCAGTTGACTAGGGTGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCAGGTTCTCCTGCTCAAGGCATTGAGTCAGTTGACTAGGGTGAAG  500

seq1  TATGATCACTGTATTGAGAGATATATTTTGTGTATAACTTCCTGTTAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATCACTGTATTGAGAGATATATTTTGTGTATAACTTCCTGTTAGTA  550

seq1  GTAACTATTGGTTTTGTGGTGAAGATTTTCTTACTTTTTCTACCATATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTATTGGTTTTGTGGTGAAGATTTTCTTACTTTTTCTACCATATCT  600

seq1  GTATTTTCTTAGAACTACTGGACTTATGTGGTACAGGAGGCTGCTTAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTCTTAGAACTACTGGACTTATGTGGTACAGGAGGCTGCTTAGCA  650

seq1  GTTTGGAATAGTTTTACTCTATAAATTTCCCTCAACTATGTTGCACATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGAATAGTTTTACTCTATAAATTTCCCTCAACTATGTTGCACATCT  700

seq1  GCCTCATTTTCCCCCTTTGGAGTGCATGCCTTCAGCACATAATTTTCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCATTTTCCCCCTTTGGAGTGCATGCCTTCAGCACATAATTTTCATA  750

seq1  ACTAAAAAACAAGGCCATTAGAGGAATTATATTCTCCCAACGGTTCCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAAACAAGGCCATTAGAGGAATTATATTCTCCCAACGGTTCCTTG  800

seq1  ATGTGAAAACAATATCCCACTAATATTAGTGAAAGGAAAATACCTTTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAAACAATATCCCACTAATATTAGTGAAAGGAAAATACCTTTAAT  850

seq1  AACCCATTTAAATACGGGATTAGAATTCGGGAACTGGTCAGAAACATTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATTTAAATACGGGATTAGAATTCGGGAACTGGTCAGAAACATTTT  900

seq1  TCATTTGAATCAGCTTTTCTTGATTCACTTGACAAAGTAAAATAACC-TT  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCATTTGAATCAGCTTTTCTTGATTCACTTGACAAAGTAAAATAACCTTT  950

seq1  GAAGTTCTGACAAAACTAACTTAAGTACTCATAAAGTAGTCCTAATATAT  999
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GAAGTTCTGACAAAACTAACTTAAGTACTCATTAAGTAGTCCTAATATAT  1000

seq1  TGATTTGAGGATAGATGACATTAAAAAGGTGATTATTCCTTGAAAAGTGC  1049
      |||||||||||||||||||||| |||| |||||||||||||| |||||||
seq2  TGATTTGAGGATAGATGACATT-AAAACGTGATTATTCCTTG-AAAGTGC  1048

seq1  TTTTTTGCAGTTTCCAGCAAAAACATAAAAGCTCCCTTCCTCACCATACA  1099
       ||||||||| ||| ||| ||||||| |||||||||||||||| ||||||
seq2  -TTTTTGCAG-TTCAAGC-AAAACAT-AAAGCTCCCTTCCTCA-CATACA  1093

seq1  TTCTGGCTTTGTTGAAGTTTTGTGTTCATT  1129
      ||||||| ||||||||  |||||| |||||
seq2  TTCTGGC-TTGTTGAAAGTTTGTG-TCATT  1121

seq1: chr5_105365041_105366179
seq2: B6Ng01-331D22.g_69_1196 (reverse)

seq1  AACTAAAGCCAGGTGATTCTCCCAGAAGCCCCACGATGAGAGATCAATGC  50
      ||||||   ||||||||  |||| |||||||| |||||||||||  ||  
seq2  AACTAA--GCAGGTGAT--TCCCTGAAGCCCC-CGATGAGAGATTCAT-T  44

seq1  CCTGGATCATCAAGAATTCTTCACCAGTACA-TCTG-TAATTCAACATAC  98
      ||||||||||| |||||   ||||||||||| |||| |||||||||||||
seq2  CCTGGATCATCCAGAAT--CTCACCAGTACATTCTGTTAATTCAACATAC  92

seq1  ACAAAGGTAATGTCAAAGTTATTTAGTAGATTCACTGTTGCTTCCCTTAA  148
      || || |||||||| ||||   ||||||||||||||||||| ||||||||
seq2  ACCAA-GTAATGTCCAAGT--ATTAGTAGATTCACTGTTGC-TCCCTTAA  138

seq1  AAACTTATAATCTCAACATATCATTAAAAATTTCTCCCTTTTATCTGAAT  198
      |||||||| ||||||||||||||||||||| ||||||| |||||||||||
seq2  AAACTTAT-ATCTCAACATATCATTAAAAA-TTCTCCC-TTTATCTGAAT  185

seq1  CACAGTAGTCATGATGTGCTTACAATTTTGTTATGTATTATG-CCAATCA  247
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CACAGTAGTCATGATGTGCTTACAATTTTGTTATGTATTATGCCCAATCA  235

seq1  TCTGAATCTATGTGAGGCAGTCACCATTGTTAATTTCAAAAACTAT-CCA  296
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCTGAATCTATGTGAGGCAGTCACCATTGTTAATTTCAAAAACTATCCCA  285

seq1  GAGAAGTGTAGCTGCCATATCCACTTAAAAGCATACAGGATGAAGGCCTA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTGTAGCTGCCATATCCACTTAAAAGCATACAGGATGAAGGCCTA  335

seq1  ATAAACTTGGGGAGTTTACAGAGTCACACTATGATCCAACTCTGTAGACT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTTGGGGAGTTTACAGAGTCACACTATGATCCAACTCTGTAGACT  385

seq1  TCACGGTGTCATTCCTTTCTGAATCTATAATGCTGCTCTCTTCAACAGGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGGTGTCATTCCTTTCTGAATCTATAATGCTGCTCTCTTCAACAGGC  435

seq1  AAAAGCATGTTTCAAGTATTGTTGTTACTCCCAAAGCAGAAAACTCCAGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCATGTTTCAAGTATTGTTGTTACTCCCAAAGCAGAAAACTCCAGC  485

seq1  TTCCTAATGACACAAGCATTCCAAAGAGATCTAAGCTCTGTCAGCATTTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAATGACACAAGCATTCCAAAGAGATCTAAGCTCTGTCAGCATTTT  535

seq1  CCTGACCCAGGAGACAGTCATGCACAAGAACAGATGCATAGAATTCTAGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCCAGGAGACAGTCATGCACAAGAACAGATGCATAGAATTCTAGA  585

seq1  CCTGGAACCAAAGGAAATTAAGAGTTTCAGCTAGTGCTCGCTTCAACAGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAACCAAAGGAAATTAAGAGTTTCAGCTAGTGCTCGCTTCAACAGC  635

seq1  ACATATAGTAAAATTGGAATGATACAGAGAAGATTAGCATGGCCACTGTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAGTAAAATTGGAATGATACAGAGAAGATTAGCATGGCCACTGTG  685

seq1  CAAGAATGACACGCAAATTCATGAAGCATTCTATATTTTTTGGTCATCAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATGACACGCAAATTCATGAAGCATTCTATATTTTTTGGTCATCAA  735

seq1  TGGGAAGAGAGGCCCTTGGTCCTGGGAAGGCGCTACACCCCAACATAGGG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGAGAGGCCCTTGGTCCTGGGAAGGCGCTACACCCCAACATAGGG  785

seq1  GAATGCCAGGACAAGGAATGGGACTGGGTGTGTTGGGGAGCAGGGGGAGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCCAGGACAAGGAATGGGACTGGGTGTGTTGGGGAGCAGGGGGAGA  835

seq1  AGGAAGGGGATAGGTGATTTTTGGAGGGGAAACTAGGAAAGGGGATAACA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGGGATAGGTGATTTTTGGAGGGGAAACTAGGAAAGGGGATAACA  885

seq1  TTTGAAATGTAAATAAAGAAAATATCTAATAGAAAAAATAAAGCCAACAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATGTAAATAAAGAAAATATCTAATAGAAAAAATAAAGCCAACAA  935

seq1  TACTCCAAAAAAAAAAAAAAGTTTCAGCTGGGAGTCTATTCCTGTACTAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCAAAAAAAAAAAAAAGTTTCAGCTGGGAGTCTATTCCTGTACTAA  985

seq1  GCCTGAAGTGACAACCACAGCTGCTCAGCTACAGGATGTCCCCAGCAGCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAAGTGACAACCACAGCTGCTCAGCTACAGGATGTCCCCAGCAGCA  1035

seq1  CTGGTGACAAACTGAACCTGTGGTACCAGTGGGAGCCCAGCTGCATTCAG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGACAAACTGAACCTGTGGTACCAGTGGGAGCCCAGCTGCATTCAG  1085

seq1  TGGGCCTTACACTGGTTAGGAAAGGAGCTGCTGCAAAGAATTC  1139
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCTTACACTGGTTAGGAAAGGAGCTGCTGCAAAGAATTC  1128