BAC Information

Click to search

BAC

Clone NameB6Ng01-331L07
Chromosome5 (Build37)
Map Location 126,996,037 - 127,082,547
singlet/doubletdoublet
Overlap genenone
Upstream geneAacs, Tmem132b, EG231736, LOC100039178, LOC665760
Downstream geneLOC100040327, Tmem132c, Slc15a4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331L07.bB6Ng01-331L07.g
ACCGA118002GA118003
length1,1621,099
definitionB6Ng01-331L07.b B6Ng01-331L07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,996,037 - 126,997,196)(127,081,456 - 127,082,547)
sequence
gaattccattttgaaggttttaagtaggcatcaggttgctggctacactg
taatgatgatggattctagaactttctcatattttagtgatttactaaat
aatttagagaaaaatcacgagcattatatcttctaagcagggtggaactg
gagtgaacctttcttccctcaaaacactgtgcagcatgctttgccttgtt
acactagcgtcctaagatgcagttactcaaagggtagcatttggagtaat
agacagtcgggttaggtggcttgaaaacaatttggatactgcctcagtta
ttttatttgtttcttcgacaaagtgacctgacaagcgtgacttaaagaag
gaaggattgatcttagctcactctttgaggttagtgtctgtcacagcggg
gaaggcatgacagcaggagcacaaggcagctggccacatgatatccacag
tggggaagcagagagagatggatgctggtcctcagctcactttttccttt
ttattcagtcccgtatcccagctggtgggatggtgctgccctcattcagg
tagaacttcctgcctcagttgcctttatttagaaattccttcttagacac
agccagagatttttggcacacaggtgaatttagataccttcaaattgaca
ttacagatgaacccgtgaatttttcaaaatgtttaagaagatgtaaagga
aaattgaactttaaaaatgcactacattgatacacacccattgaactttt
ttacatgattagggtatgcattactattaacaataatgcaagcaattcta
agagcttttgaggctgcagagcactgagatttattgttttagacacctgg
agacctagtacaagactgtgaacttgaatattcaggtttctttaacactt
ttgttcagttcagtgataaaatgtagacctctatgaacccaagagtttac
tagtgagtgactgaaccattttgggatgggagtggtcttgtccactctga
taaaacttcagtccaagtagctacttgtggttaaagaagtgtgatgggtc
aagtgggaaaccgctgccctgggtgtagtgattgctcttccctctcctct
tcttcttcatcccctctttctcatcagtgaaaatccagaaaatactgttc
ctaacagataga
gaattctttgaatgatctcatctaaatcttggctacatgagtaactttcc
gatacttgcattttttcccctattgtgcagatatcccttccccccacccc
ccaccccgtggcagatttagttttctgcaaacaaacccaccctttgagga
acaattgcctctctttttcttttattgagtctctggctcattgactcttt
tatttttatctattactctggtgggtttctttctttctttcttttttttt
tttaatgtttctctggcttagttaaaccaatgagcctttccaaaataaat
tcttggcagagattctcattatccatattagacagacattaaaagaagaa
acgaggatctggagagatggctcctgcactcagggcatttgctgcatttg
cacagcttgggttcccatcacccacttggcagctcacagtcatctctaag
ttcagtctcagggaatccggtgccatcttctgaacttcatgggcactgca
cacacatgggacacatacacacattcggaaaagtaagcttacccataaaa
taattaaatagttttttagaaaagaaatatgcctttaaaaaacaaaaaac
aaacaaggaacctggattctccatagaccatgaggaatggccatgattta
ggtatggagttgtccagaaataggttcctaggagtacagaaggtaatata
acagctcactgaaattgtagatgctttatggctgacagctctcaatccaa
cacaactccacagctaacacaagtcccctttggcatcacccagagactca
gctctattgtatatatgtatatttttagtataaaatatcaatcttgcaga
gaaactgaacacacaggtccaaaggggtagggttatggctgtgggggtga
caggcatggcaaattcataaattacagtgcttattttactttgaaggatg
gttttaggactggtggttaatataccttaaccatgaaatttcataaaagt
gaaatttcagaaaaaattaaagttgtggctttcattaagaaaggatagca
cttcaaggcacaaggattcctcagttttctaggttatttgtcaaattga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_126996037_126997196
seq2: B6Ng01-331L07.b_50_1211

seq1  GAATTCCATTTTGAAGGTTTTAAGTAGGCATCAGGTTGCTGGCTACACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTTGAAGGTTTTAAGTAGGCATCAGGTTGCTGGCTACACTG  50

seq1  TAATGATGATGGATTCTAGAACTTTCTCATATTTTAGTGATTTACTAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATGATGGATTCTAGAACTTTCTCATATTTTAGTGATTTACTAAAT  100

seq1  AATTTAGAGAAAAATCACGAGCATTATATCTTCTAAGCAGGGTGGAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGAGAAAAATCACGAGCATTATATCTTCTAAGCAGGGTGGAACTG  150

seq1  GAGTGAACCTTTCTTCCCTCAAAACACTGTGCAGCATGCTTTGCCTTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAACCTTTCTTCCCTCAAAACACTGTGCAGCATGCTTTGCCTTGTT  200

seq1  ACACTAGCGTCCTAAGATGCAGTTACTCAAAGGGTAGCATTTGGAGTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAGCGTCCTAAGATGCAGTTACTCAAAGGGTAGCATTTGGAGTAAT  250

seq1  AGACAGTCGGGTTAGGTGGCTTGAAAACAATTTGGATACTGCCTCAGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTCGGGTTAGGTGGCTTGAAAACAATTTGGATACTGCCTCAGTTA  300

seq1  TTTTATTTGTTTCTTCGACAAAGTGACCTGACAAGCGTGACTTAAAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTGTTTCTTCGACAAAGTGACCTGACAAGCGTGACTTAAAGAAG  350

seq1  GAAGGATTGATCTTAGCTCACTCTTTGAGGTTAGTGTCTGTCACAGCGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGATTGATCTTAGCTCACTCTTTGAGGTTAGTGTCTGTCACAGCGGG  400

seq1  GAAGGCATGACAGCAGGAGCACAAGGCAGCTGGCCACATGATATCCACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCATGACAGCAGGAGCACAAGGCAGCTGGCCACATGATATCCACAG  450

seq1  TGGGGAAGCAGAGAGAGATGGATGCTGGTCCTCAGCTCACTTTTTCCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAAGCAGAGAGAGATGGATGCTGGTCCTCAGCTCACTTTTTCCTTT  500

seq1  TTATTCAGTCCCGTATCCCAGCTGGTGGGATGGTGCTGCCCTCATTCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCAGTCCCGTATCCCAGCTGGTGGGATGGTGCTGCCCTCATTCAGG  550

seq1  TAGAACTTCCTGCCTCAGTTGCCTTTATTTAGAAATTCCTTCTTAGACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTTCCTGCCTCAGTTGCCTTTATTTAGAAATTCCTTCTTAGACAC  600

seq1  AGCCAGAGATTTTTGGCACACAGGTGAATTTAGATACCTTCAAATTGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAGATTTTTGGCACACAGGTGAATTTAGATACCTTCAAATTGACA  650

seq1  TTACAGATGAACCCGTGAATTTTTCAAAATGTTTAAGAAGATGTAAAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGATGAACCCGTGAATTTTTCAAAATGTTTAAGAAGATGTAAAGGA  700

seq1  AAATTGAACTTTAAAAATGCACTACATTGATACACACCCATTGAACTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGAACTTTAAAAATGCACTACATTGATACACACCCATTGAACTTTT  750

seq1  TTACATGATTAGGGTATGCATTACTATTAACAATAATGCAAGCAATTCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGATTAGGGTATGCATTACTATTAACAATAATGCAAGCAATTCTA  800

seq1  AGAGCTTTTGAGGCTGCAGAGCACTGAGATTTATTGTTTTAGACACCTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTTTGAGGCTGCAGAGCACTGAGATTTATTGTTTTAGACACCTGG  850

seq1  AGACCTAGTACAAGACTGTGAACTTGAATATTCAGGTTTCTTTAACACTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTAGTACAAGACTGTGAACTTGAATATTCAGGTTTCTTTAACACTT  900

seq1  TTGTTCAGTTCAGTGATAAAATGTAGACCTCTATGAACCCAAGAGTTTAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCAGTTCAGTGATAAAATGTAGACCTCTATGAACCCAAGAGTTTAC  950

seq1  TAGTGAGTGACTGAACCATTTTTGGAT-GGAGTGGTCTTGTCCACTCTGA  999
      |||||||||||||||||||||| |||| ||||||||||||||||||||||
seq2  TAGTGAGTGACTGAACCATTTTGGGATGGGAGTGGTCTTGTCCACTCTGA  1000

seq1  TAAAACTTCAGTCCAAGTAGCTACTTGTGGTTAAAG-AGTGTGAT-GGTC  1047
      |||||||||||||||||||||||||||||||||||| |||||||| ||||
seq2  TAAAACTTCAGTCCAAGTAGCTACTTGTGGTTAAAGAAGTGTGATGGGTC  1050

seq1  AAGTGGGAAAACGCTTGCCTGGTTGTAGTTGATTTGCTCCTCCCTCCTCC  1097
      |||||||||| ||||  ||||| ||||| ||| |||||| ||||| ||||
seq2  AAGTGGGAAACCGCTGCCCTGGGTGTAG-TGA-TTGCTCTTCCCT-CTCC  1097

seq1  TCTTCCTCCTCATCCCCTCTTTCTCATCAGTGAAAAT-CAGAAAATACTG  1146
      ||||| || |||||||||||||||||||||||||||| ||||||||||||
seq2  TCTTCTTCTTCATCCCCTCTTTCTCATCAGTGAAAATCCAGAAAATACTG  1147

seq1  TTCTTAACAG-TAGA  1160
      ||| |||||| ||||
seq2  TTCCTAACAGATAGA  1162

seq1: chr5_127081456_127082547
seq2: B6Ng01-331L07.g_68_1166 (reverse)

seq1  TCAATATGACAAATAA-CTAGAAAACTGAGGGAATCC-TGTGCC-TGGAG  47
      ||||| |||||||||| |||||||||||| ||||||| |||||| || ||
seq2  TCAATTTGACAAATAACCTAGAAAACTGA-GGAATCCTTGTGCCTTGAAG  49

seq1  TGCTATCCTTTCCTTATGGAAGCCAC-ACTTTATTTTTTCCTGAAATTTC  96
      |||||||||||| | ||| ||||||| |||||| ||||| ||||||||||
seq2  TGCTATCCTTTCTTAATGAAAGCCACAACTTTAATTTTTTCTGAAATTTC  99

seq1  ACTTTTATGAAATTTCATGGTTAA-GTATATTAACCA-CAGTCCCTAAAA  144
      |||||||||||||||||||||||| |||||||||||| |||| |||||||
seq2  ACTTTTATGAAATTTCATGGTTAAGGTATATTAACCACCAGT-CCTAAAA  148

seq1  CCATCCTTCAAAGTAAAAT-AGCACTGTAATTTATGAATTTGCCATGCCT  193
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCATCCTTCAAAGTAAAATAAGCACTGTAATTTATGAATTTGCCATGCCT  198

seq1  GTCACCCCCACAGCCAT-ACCCTACCCC-TTGGACCTGTGTGTTCAGTTT  241
      ||||||||||||||||| |||||||||| |||||||||||||||||||||
seq2  GTCACCCCCACAGCCATAACCCTACCCCTTTGGACCTGTGTGTTCAGTTT  248

seq1  CTCTGCAAGATTGATATTTTATACTAAAAATATACATATATACAATAGAG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCAAGATTGATATTTTATACTAAAAATATACATATATACAATAGAG  298

seq1  CTGAGTCTCTGGGTGATGCCAAAGGGGACTTGTGTTAGCTGTGGAGTTGT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCTCTGGGTGATGCCAAAGGGGACTTGTGTTAGCTGTGGAGTTGT  348

seq1  GTTGGATTGAGAGCTGTCAGCCATAAAGCATCTACAATTTCAGTGAGCTG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGATTGAGAGCTGTCAGCCATAAAGCATCTACAATTTCAGTGAGCTG  398

seq1  TTATATTACCTTCTGTACTCCTAGGAACCTATTTCTGGACAACTCCATAC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTACCTTCTGTACTCCTAGGAACCTATTTCTGGACAACTCCATAC  448

seq1  CTAAATCATGGCCATTCCTCATGGTCTATGGAGAATCCAGGTTCCTTGTT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATCATGGCCATTCCTCATGGTCTATGGAGAATCCAGGTTCCTTGTT  498

seq1  TGTTTTTTGTTTTTTAAAGGCATATTTCTTTTCTAAAAAACTATTTAATT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTGTTTTTTAAAGGCATATTTCTTTTCTAAAAAACTATTTAATT  548

seq1  ATTTTATGGGTAAGCTTACTTTTCCGAATGTGTGTATGTGTCCCATGTGT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATGGGTAAGCTTACTTTTCCGAATGTGTGTATGTGTCCCATGTGT  598

seq1  GTGCAGTGCCCATGAAGTTCAGAAGATGGCACCGGATTCCCTGAGACTGA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGTGCCCATGAAGTTCAGAAGATGGCACCGGATTCCCTGAGACTGA  648

seq1  ACTTAGAGATGACTGTGAGCTGCCAAGTGGGTGATGGGAACCCAAGCTGT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGAGATGACTGTGAGCTGCCAAGTGGGTGATGGGAACCCAAGCTGT  698

seq1  GCAAATGCAGCAAATGCCCTGAGTGCAGGAGCCATCTCTCCAGATCCTCG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGCAGCAAATGCCCTGAGTGCAGGAGCCATCTCTCCAGATCCTCG  748

seq1  TTTCTTCTTTTAATGTCTGTCTAATATGGATAATGAGAATCTCTGCCAAG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTTTTAATGTCTGTCTAATATGGATAATGAGAATCTCTGCCAAG  798

seq1  AATTTATTTTGGAAAGGCTCATTGGTTTAACTAAGCCAGAGAAACATTAA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTTTGGAAAGGCTCATTGGTTTAACTAAGCCAGAGAAACATTAA  848

seq1  AAAAAAAAAAGAAAGAAAGAAAGAAACCCACCAGAGTAATAGATAAAAAT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAGAAAGAAAGAAAGAAACCCACCAGAGTAATAGATAAAAAT  898

seq1  AAAAGAGTCAATGAGCCAGAGACTCAATAAAAGAAAAAGAGAGGCAATTG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGTCAATGAGCCAGAGACTCAATAAAAGAAAAAGAGAGGCAATTG  948

seq1  TTCCTCAAAGGGTGGGTTTGTTTGCAGAAAACTAAATCTGCCACGGGGTG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCAAAGGGTGGGTTTGTTTGCAGAAAACTAAATCTGCCACGGGGTG  998

seq1  GGGGGTGGGGGGAAGGGATATCTGCACAATAGGGGAAAAAATGCAAGTAT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTGGGGGGAAGGGATATCTGCACAATAGGGGAAAAAATGCAAGTAT  1048

seq1  CGGAAAGTTACTCATGTAGCCAAGATTTAGATGAGATCATTCAAAGAATT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAAGTTACTCATGTAGCCAAGATTTAGATGAGATCATTCAAAGAATT  1098

seq1  C  1092
      |
seq2  C  1099