BAC Information

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BAC

Clone NameB6Ng01-332B05
Chromosome5 (Build37)
Map Location 69,203,160 - 69,204,279
singlet/doubletsinglet
Overlap genenone
Upstream geneAtp8a1, EG330097, EG666977, AY616753
Downstream geneLOC666996, Kctd8, LOC545756, Yipf7, Guf1, Gnpda2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332B05.bB6Ng01-332B05.g
ACCGA118280GA118281
length1,1211,218
definitionB6Ng01-332B05.b B6Ng01-332B05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaactaaacatgagtagaaataaaaatataaaagctatattctaa
acgtttgaatatctgaaatttgctagagattgaaggaaagaccatccaga
gaccgccccaccttgggatccatcccatccacagacaccaaacccagaca
ctattgctgatgccaagaactgcttgcagacagaagcctggtagagctgt
tctctgagaggctcttctagtacctgactaagacagattcaaatagtcac
aaacaaccactgggctgatccagggcatccaaataaaagagatagggaag
aattgaaggagctgaaggggattgcattcccataagagcaacaacaatat
caactcaccagatcactcagagctttcagggaataaactaccaaccatag
agtatacatgggctggtccgggcctcctgctacatatatagcagaggact
gctttgtctggcatcgatggaaggggaagctcttggtcctgtggaggctt
gttggcccagcaaagcaagatgctaggagggtgaggcgggagtgggtgga
ttggtagcacagtaccttcttagagacaaagggtgcgggatgtgattggg
gggttacagaggggagaccgggaatggggcaacatttgaaatgtaaatta
aaaaattgtatagctgaaactaaattcagtaaaactttagcaaataggtt
aaccagaatttaaaatactaatgaatcactattatctctttattagaatg
gctaaacatcaaagactgacagcaataaatgctgacaaggatgtgaagca
aaaggaattgcatttgtgacaaactgggatacagctctagacagcaagac
taaaacacagtttatgagataaacatatgaccagttcttaacatgtcatc
tagtaattctaccctttaatacttacacaaacaagtgaaatattaaattg
aatgtatttcacatagaaaactattctcagcgatttaaagaaatagcatt
taaaactgtgctaaacttttaggcaatcaaattgatttttggtagtaatg
gtaaaaataacctggggggttttgccctaggcaaagtaagtttctggtag
ctaaaagatactctattgagc
gaattcattcttttctctgtgacttgggtaaaatgctttcaactccagtt
aaaagcttttaattacatgtgtgtaagttattcttgcattcacatttgtt
gcaaaagcaccaacatttagtttatatagtggagtacttttaaaaaaact
atccttggctcctgttaccactgaagaccagacagatgtcaatgctgtag
tcagaaggcatgttgacgtctgtgatcccagctgcatcgcaaggctttat
gtcgagcgctatcatctcgccagcaagaacacacacggacaaccggattc
ttctgcatcaatgctttattatgctagcttcagcatgaagaggaagaccc
agagcccagaaatggtgctgcttatataggcctaggagtgacgtgtccat
acctgagtggttatgctaccagtacctcattaatatgtgtcaggccagac
agtgacttggcaaaaaactcttatgcacatgcgcacattggttgtttacc
catattcatggttggtggccagtggtagccagtgccaccctgcaacggca
catgtggcttcccacatctccccctttttgttttaataaaatgatgctgg
actaggcctatgcaattatgtccatctgccacggctcctgttttagatcg
ttcctctaatgtcacagccttacctgtcatagggtaaccatatcgccaat
gggcccgtgtcttaggttggtctgtgcatgaggaaagttgcccgtctctg
gatactgcagtgctgtgtgacagtaattgctaaatgacttagggcgaact
ctacaaaagaggccagccaaaacatgaattagtggggaaatcatgatcac
tctattgtgtgtaatgaggaaacctcagcgatgtgcaagggctgatcaat
gatcgttgagtctctctcaacccagtgcaatggatccataaatccgtggg
gtgcaagagcagagaactcaatgccaactaattcttgagcatagatacca
aatttcaggggaggtgccgttttcatagctaaaggtgcctgagttataat
cacttgtcacgtttttgtggtttttgatttgcatcccacagagcatgaca
ccagttcacagcaatatgcagccacaaacaaaattcacttccaccatcta
agaaaggcaaggtaggcagaagtaatttgccaaccacaaggaagtgggtt
tccatatcttcgtgttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_69203160_69204279
seq2: B6Ng01-332B05.b_44_1164

seq1  GAATTCAACTAAACATGAGTAGAAATAAAAATATAAAAGCTATATTCTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTAAACATGAGTAGAAATAAAAATATAAAAGCTATATTCTAA  50

seq1  ACGTTTGAATATCTGAAATTTGCTAGAGATTGAAGGAAAGACCATCCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTTGAATATCTGAAATTTGCTAGAGATTGAAGGAAAGACCATCCAGA  100

seq1  GACCGCCCCACCTTGGGATCCATCCCATCCACAGACACCAAACCCAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCGCCCCACCTTGGGATCCATCCCATCCACAGACACCAAACCCAGACA  150

seq1  CTATTGCTGATGCCAAGAACTGCTTGCAGACAGAAGCCTGGTAGAGCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGCTGATGCCAAGAACTGCTTGCAGACAGAAGCCTGGTAGAGCTGT  200

seq1  TCTCTGAGAGGCTCTTCTAGTACCTGACTAAGACAGATTCAAATAGTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAGAGGCTCTTCTAGTACCTGACTAAGACAGATTCAAATAGTCAC  250

seq1  AAACAACCACTGGGCTGATCCAGGGCATCCAAATAAAAGAGATAGGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACCACTGGGCTGATCCAGGGCATCCAAATAAAAGAGATAGGGAAG  300

seq1  AATTGAAGGAGCTGAAGGGGATTGCATTCCCATAAGAGCAACAACAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAAGGAGCTGAAGGGGATTGCATTCCCATAAGAGCAACAACAATAT  350

seq1  CAACTCACCAGATCACTCAGAGCTTTCAGGGAATAAACTACCAACCATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCACCAGATCACTCAGAGCTTTCAGGGAATAAACTACCAACCATAG  400

seq1  AGTATACATGGGCTGGTCCGGGCCTCCTGCTACATATATAGCAGAGGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATACATGGGCTGGTCCGGGCCTCCTGCTACATATATAGCAGAGGACT  450

seq1  GCTTTGTCTGGCATCGATGGAAGGGGAAGCTCTTGGTCCTGTGGAGGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTCTGGCATCGATGGAAGGGGAAGCTCTTGGTCCTGTGGAGGCTT  500

seq1  GTTGGCCCAGCAAAGCAAGATGCTAGGAGGGTGAGGCGGGAGTGGGTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCCCAGCAAAGCAAGATGCTAGGAGGGTGAGGCGGGAGTGGGTGGA  550

seq1  TTGGTAGCACAGTACCTTCTTAGAGACAAAGGGTGCGGGATGTGATTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAGCACAGTACCTTCTTAGAGACAAAGGGTGCGGGATGTGATTGGG  600

seq1  GGGTTACAGAGGGGAGACCGGGAATGGGGCAACATTTGAAATGTAAATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTACAGAGGGGAGACCGGGAATGGGGCAACATTTGAAATGTAAATTA  650

seq1  AAAAATTGTATAGCTGAAACTAAATTCAGTAAAACTTTAGCAAATAGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTGTATAGCTGAAACTAAATTCAGTAAAACTTTAGCAAATAGGTT  700

seq1  AACCAGAA-TTAAAATACTAATGAATCACTATTATCTCTTTATTAGAATG  749
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGAATTTAAAATACTAATGAATCACTATTATCTCTTTATTAGAATG  750

seq1  GCTAAACATCAAAGACTGACAGCAATAAATGCTGACAAGGATGTGAAGCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAACATCAAAGACTGACAGCAATAAATGCTGACAAGGATGTGAAGCA  800

seq1  AAAGGAATTGCATTTGTGACAAACTGGGATACAGCTCTAAGACAGCAAGA  849
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAAGGAATTGCATTTGTGACAAACTGGGATACAGCTCT-AGACAGCAAGA  849

seq1  CTAAAACACAGTTTATGAGATAAACATATGACCAGTTCTTACCATGTCAT  899
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTAAAACACAGTTTATGAGATAAACATATGACCAGTTCTTAACATGTCAT  899

seq1  CTAGTAATTCTACCCTTTAATACTTACACAAACAAGTGAAATAT--AAAT  947
      ||||||||||||||||||||||||||||||||||||||||||||  || |
seq2  CTAGTAATTCTACCCTTTAATACTTACACAAACAAGTGAAATATTAAATT  949

seq1  GAATGTATTTCACATAGAAAACTATTCACAGCGATTTAAAGAAATAGCAT  997
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GAATGTATTTCACATAGAAAACTATTCTCAGCGATTTAAAGAAATAGCAT  999

seq1  TTAAAACTGTGCT-AACTTTTAGGCAATCAAAATGAATTTTGGTAAGTAA  1046
      ||||||||||||| |||||||||||||||||| ||| ||||||| |||||
seq2  TTAAAACTGTGCTAAACTTTTAGGCAATCAAATTGATTTTTGGT-AGTAA  1048

seq1  TTGTAAAAATAAACTGTGTGGTTTTG-CCTAGGTAGAGTAAGTTTCTGTA  1095
      | |||||||||| ||| | ||||||| |||||| | ||||||||||||  
seq2  TGGTAAAAATAACCTGGGGGGTTTTGCCCTAGGCAAAGTAAGTTTCTGGT  1098

seq1  TGCTAAAAAGATACACGTATTGAGC  1120
       ||| ||||||||| | ||||||||
seq2  AGCT-AAAAGATACTC-TATTGAGC  1121