BAC Information

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BAC

Clone NameB6Ng01-333K23
Chromosome5 (Build37)
Map Location 58,457,041 - 58,457,161
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041349, LOC666455, LOC625721, EG666465, Pcdh7
Downstream geneLOC100041385, LOC100041396, LOC666499, EG625870
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333K23.bB6Ng01-333K23.g
ACCGA119402GA119403
length1,203156
definitionB6Ng01-333K23.b B6Ng01-333K23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgttgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccacgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctattctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacctccttagttagagtcacgccaagatatttatattatt
tgtgactattgagaaggtgtagtttccctaatttctttctcagcctgtta
ttcttgtatagagaaggccatgacttgtttggagtaatttatatccagct
acttcaccgaagctgtttatgaggtaggagtctctggtaaattttaggca
cttatattactatcatcatctgcaaggatattgactcctttcattgatcc
ctgaatccttggtgcattgctgctaactcagacctgtgtaagataggagt
act
aaaaggttcaacaagctgaagtgcccaagtgaggacacctcagtcccact
tgggtgagacaagaaagtggggagggatggagagacttgggaaggaaagt
ggatggggtggaggataatagggggagtggggaaccagatctggtattgg
atgagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_58457041_58457161
seq2: B6Ng01-333K23.g_78_227 (reverse)

seq1  CCTCATCCAATACCAGATCAGATTTCCCTCTTCTC-------CCTCC---  40
      ||||||||||||||||||| | || ||| || | |       |||||   
seq2  CCTCATCCAATACCAGATCTGGTTCCCCACTCCCCCTATTATCCTCCACC  50

seq1  ----CCACTT----------GTGATT------------TCTTTCTTCTCT  64
          ||||||          ||   |             ||||||| |||
seq2  CCATCCACTTTCCTTCCCAAGTCTCTCCATCCCTCCCCACTTTCTTGTCT  100

seq1  TTCCCAAGTGGGATGTGGGATTGAAGCATCCTCCCTTGGGCACTTCAGCT  114
        |||||       |||||| ||| |  ||||| ||||||||||||||||
seq2  CACCCAA-------GTGGGACTGAGGTGTCCTCACTTGGGCACTTCAGCT  143

seq1  TGTTGAA  121
      |||||||
seq2  TGTTGAA  150