BAC Information

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BAC

Clone NameB6Ng01-333L18
Chromosome5 (Build37)
Map Location 99,565,074 - 99,565,629
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666326, Prdm8, Fgf5, 1700007G11Rik, Bmp3, Prkg2, LOC100041680
Downstream geneRasgef1b, A930011G23Rik, LOC100040738, LOC666364, LOC100040763, LOC100040774, Hnrpd, 4930524J08Rik, Hnrpdl, Enoph1, BC062109
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333L18.bB6Ng01-333L18.g
ACCGA119432GA119433
length1,230550
definitionB6Ng01-333L18.b B6Ng01-333L18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatactttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaatcctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcac
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttatcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctatactagtactatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcacgctgagatattttatattat
ttgtgactattgagaagggtgttgtttctctaatttctttctcagccttg
tttattctttgtgtagaagaaaggccattgacttgttgagtttatttttt
acatccagctacttcaccgagtcatttattcaggttaggagttctctggg
tggaattttagggtcacttatatatacatctatcatctgcaaagtgattt
ttgaactttcatctttccattgaatccttgaatctcttttggtgtgcgaa
tgctcgtagctataatattcacagaggatc
cagactcacatcccactttaattgtcactctaccagctcgggccagtttt
agtacctccagactgaggaaggagctggtaccctgtctgctttattatta
cctttctttctcttcattcagtgttatttaggataatgagagctcgtatc
tctagctgcatatgtagcagaagatgtagtcggccatcactgggaagaga
ggccccttggtattgcaaactttatatgccccagtacagtgggatgccag
gaccaagaagcaggagtgggtaggtaggggagcagggccaggggagggta
tagggaactttcgggatagcatttgaaatgtatataaagaaaatatctaa
taaaaaaaataaatttaaggtggaacaacaatatgaactaaccagtaccc
cccggagctcgtgtctctagctgcatatgaatcagaagatggcctattcg
gtcatcagtggaaagagaggcccattggtcatgcaaactttatatgcctc
agtacgggggaatgccagggccaagaagtgggagtgggtgggtgggggag

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_99565074_99565629
seq2: B6Ng01-333L18.g_68_623

seq1  GAATTCCAGACTCACATCCCACTTTAATTGTCACTCTACCAGCTCGGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGACTCACATCCCACTTTAATTGTCACTCTACCAGCTCGGGCC  50

seq1  AGTTTTAGTACCTCCAGACTGAGGAAGGAGCTGGTACCCTGTCTGCTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAGTACCTCCAGACTGAGGAAGGAGCTGGTACCCTGTCTGCTTTA  100

seq1  TTATTACCTTTCTTTCTCTTCATTCAGTGTTATTTAGGATAATGAGAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACCTTTCTTTCTCTTCATTCAGTGTTATTTAGGATAATGAGAGCT  150

seq1  CGTATCTCTAGCTGCATATGTAGCAGAAGATGTAGTCGGCCATCACTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATCTCTAGCTGCATATGTAGCAGAAGATGTAGTCGGCCATCACTGGG  200

seq1  AAGAGAGGCCCCTTGGTATTGCAAACTTTATATGCCCCAGTACAGTGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGGCCCCTTGGTATTGCAAACTTTATATGCCCCAGTACAGTGGGA  250

seq1  TGCCAGGACCAAGAAGCAGGAGTGGGTAGGTAGGGGAGCAGGGCCAGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGACCAAGAAGCAGGAGTGGGTAGGTAGGGGAGCAGGGCCAGGGG  300

seq1  AGGGTATAGGGAACTTTCGGGATAGCATTTGAAATGTATATAAAGAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTATAGGGAACTTTCGGGATAGCATTTGAAATGTATATAAAGAAAAT  350

seq1  ATCTAATAAAAAAAATAAATTTAAGGTGGAACAACAATATGAACTAACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATAAAAAAAATAAATTTAAGGTGGAACAACAATATGAACTAACCA  400

seq1  GTACCCCCCGGAGCTCGTGTCTCTAGCTGCATATGAATCAGAAGATGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCCCCGGAGCTCGTGTCTCTAGCTGCATATGAATCAGAAGATGGCC  450

seq1  TATTCGGTCATCAGTGGAAAGAGAGGCCCATTGGTCATGCAAACTTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCGGTCATCAGTGGAAAGAGAGGCCCATTGGTCATGCAAACTTTATA  500

seq1  TGCCTCAGTACGGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGTGGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCAGTACGGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGTGGGTG  550

seq1  GGGGAG  556
      ||||||
seq2  GGGGAG  556