BAC Information

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BAC

Clone NameB6Ng01-334H17
Chromosome5 (Build37)
Map Location 143,088,337 - 143,089,013
singlet/doubletsinglet
Overlap genenone
Upstream geneSdk1, LOC666727, Foxk1, C330006K01Rik, D930005D10Rik, Papolb, Mmd2
Downstream geneWipi2, Slc29a4, Tnrc18, LOC100038954, LOC100041004, LOC100038972, LOC100038984, LOC100042525, LOC100038888, Zfp469, LOC666788, Fbxl18, D430018E03Rik, LOC100042558, Actb, Fscn1, 2810055G22Rik, LOC667809, Olfr718-ps1, LOC640324, LOC100042605, Rbak, 4933411G11Rik, Spdyb, Zfp12, Zfp316, Gm792, E130309D02Rik, Zdhhc4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334H17.bB6Ng01-334H17.g
ACCGA119975GA119976
length912677
definitionB6Ng01-334H17.b B6Ng01-334H17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttctaccactgccccatgcctgtcgtagtcccgaggtctgaagc
agtttcagtgtgctggttacccagacagtgaccttcaactcagagcctgt
aacagaggcataggttggcagcacctgtgggtgctaccttccgtgacagt
tcactggacacctaggttatttccagtcccgtgtttggctgtccccgtct
gtgagacattggtcagctcccaccccacctgcagggtggagcgtctagat
ctctatattgagatgccaggaggaggctgcctcactgcagagtcctgggg
agtctcacatacatctgcaggtgactgggtaaaagctaagccattgtaaa
tgcccttccaggagtatgaccgctggaactcattggtaaggtcttattgt
tgttcttcttgggttttgatagcatttgaatgaataataaaataaagctg
ctccctccatgccacaggatggccctcagcaaaatagagcctctgtatgc
caatggtgctcacaggagatattcataataagacctcaatgagtctttat
tgaataaagtaaaatatagagtgcttgtctaagcccttaggcttagaatt
ccccagtgaggggctggggtgtggctcagtggtagagcctctgcttagaa
tcccccagtgaggggctggggtgtggctcagtggtagagcctctgcctag
aatcccccagtgaggggctggggcgtggctcagtggtagagcccctgcct
agactcccccagtgaggggctggggcgtggctcagtggtagagcccctgc
cctagactcccccagtgaggggctggggtgtgtctcagtggtagagcccc
tgcctaaggattccctcagtgagggcctggggctgtgttcagtggtagag
cccctgccaaga
gaattcagggggaccaaaaacattcctgaaggatatggcgcatgggcaca
ggctatctgcgcttgaatctcagtctctgcaccctgagctcactgtcaaa
tacattagtagaaacattactaacttcccctgacctccaggagacaaaaa
ccaaatagaagcagagagagttaagccccacgtcgcacactaacccacag
gtccaagcctctctatcagatgcattaaatcctactgtctgtctcccagc
aatgtctgccccagctctcaacctcaactcaggtctctcctgacatggcc
tgaccctttcttgatcacctttcttcccacggagtccaagtaagatccca
agtggtcactggtagccacagttcctagggggcctgaatcagacctctcc
aaggctatgccctcctccttggcctaagctgtttgcccacttcactgcta
tccacttttaagcaggtcttgacaatgagcctgtggcgaccactgggaga
cccctggaataaaacgttcagtctagaaacggatatttccacctccatca
gctaaagaagttgaataaaaaataagttactatttttactgctgggatgt
ggttgttatggcaacaaagggcctgactcttgctcctgagtgggggttgg
gctatgtttgagggagaagggggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_143088337_143089013
seq2: B6Ng01-334H17.g_66_742

seq1  GAATTCAGGGGGACCAAAAACATTCCTGAAGGATATGGCGCATGGGCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGGGACCAAAAACATTCCTGAAGGATATGGCGCATGGGCACA  50

seq1  GGCTATCTGCGCTTGAATCTCAGTCTCTGCACCCTGAGCTCACTGTCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATCTGCGCTTGAATCTCAGTCTCTGCACCCTGAGCTCACTGTCAAA  100

seq1  TACATTAGTAGAAACATTACTAACTTCCCCTGACCTCCAGGAGACAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTAGTAGAAACATTACTAACTTCCCCTGACCTCCAGGAGACAAAAA  150

seq1  CCAAATAGAAGCAGAGAGAGTTAAGCCCCACGTCGCACACTAACCCACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATAGAAGCAGAGAGAGTTAAGCCCCACGTCGCACACTAACCCACAG  200

seq1  GTCCAAGCCTCTCTATCAGATGCATTAAATCCTACTGTCTGTCTCCCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAGCCTCTCTATCAGATGCATTAAATCCTACTGTCTGTCTCCCAGC  250

seq1  AATGTCTGCCCCAGCTCTCAACCTCAACTCAGGTCTCTCCTGACATGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTGCCCCAGCTCTCAACCTCAACTCAGGTCTCTCCTGACATGGCC  300

seq1  TGACCCTTTCTTGATCACCTTTCTTCCCACGGAGTCCAAGTAAGATCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCTTTCTTGATCACCTTTCTTCCCACGGAGTCCAAGTAAGATCCCA  350

seq1  AGTGGTCACTGGTAGCCACAGTTCCTAGGGGGCCTGAATCAGACCTCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCACTGGTAGCCACAGTTCCTAGGGGGCCTGAATCAGACCTCTCC  400

seq1  AAGGCTATGCCCTCCTCCTTGGCCTAAGCTGTTTGCCCACTTCACTGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTATGCCCTCCTCCTTGGCCTAAGCTGTTTGCCCACTTCACTGCTA  450

seq1  TCCACTTTTAAGCAGGTCTTGACAATGAGCCTGTGGCGACCACTGGGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTTTAAGCAGGTCTTGACAATGAGCCTGTGGCGACCACTGGGAGA  500

seq1  CCCCTGGAATAAAACGTTCAGTCTAGAAACGGATATTTCCACCTCCATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGGAATAAAACGTTCAGTCTAGAAACGGATATTTCCACCTCCATCA  550

seq1  GCTAAAGAAGTTGAATAAAAAATAAGTTACTATTTTTACTGCTGGGATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAGAAGTTGAATAAAAAATAAGTTACTATTTTTACTGCTGGGATGT  600

seq1  GGTTGTTATGGCAACAAAGGGCCTGACTCTTGCTCCTGAGTGGGGGTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTTATGGCAACAAAGGGCCTGACTCTTGCTCCTGAGTGGGGGTTGG  650

seq1  GCTATGTTTGAGGGAGAAGGGGGAGGA  677
      |||||||||||||||||||||||||||
seq2  GCTATGTTTGAGGGAGAAGGGGGAGGA  677