BAC Information

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BAC

Clone NameB6Ng01-335B08
Chromosome5 (Build37)
Map Location 95,396,528 - 95,397,624
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041003, BC061212, EG622744, LOC100041032, LOC100041042, LOC624421, AA792892, LOC665521, LOC665551, LOC100041102, LOC665560, LOC100041115, LOC624507, LOC621203, LOC100041153, LOC665499, LOC624698, LOC100041179, LOC624655, LOC100041166, LOC665469
Downstream geneLOC622894, EG666121, LOC666125, EG666133, LOC100041296, LOC100041253, LOC100041264, EG624049, EG666159, LOC666164, EG666169, D5Ertd577e, LOC100041354, LOC100040503, LOC666187, EG622731, LOC100041380, EG666203, EG666209, LOC665943, LOC433921, Cxcl13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335B08.bB6Ng01-335B08.g
ACCGA120421GA120422
length7021,104
definitionB6Ng01-335B08.b B6Ng01-335B08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacagaggaatatttaatgactgagaagcatttacagaaatg
ttcaacatccttagtcgtcagggaaatccaaatcaaaatgactctgggat
ttcattttactcccattaaaagggaaacagttcatggtgactaggatgta
gaacatggtgaacactctcttcctttgctagtaggagtgcaaacttgtac
actcagtctggaaatcaattcagtgctttctcaaataactgtaaatggtt
ctctcaggactatttataccatccctggtcatatacttaaaagatgcttc
actataccataagaacagtgttttaactatgctcatagttttatttgtaa
tagccataatcttaaaatgaccaaaatgtccctcaagtgaacatttacac
aacagaatactactcactggttaaaaacaatgacatcatgaaatttgtag
gccaaacccagacccagaaagataaacgtggtgtgtactcataagtggat
attagtaagaaagaataggataaccatgctatccatagagcaaagaaact
gacaaggaaggcctggcagaggatgcttgaatcttactatggacagaaat
aaagtacacatcaggggtagatggatggagggtacgatgtgtgagagaaa
ttctggatggtaatcagaggaatcatatgtggggagtgtgaagggagaaa
gg
gaattcagagcaggaattcagtagcattctatctacttatctaataccta
atataaaaaatcaaaaacttcctcttgatagggagctagagtccctgagc
actttccttttgatgtctcttgacctcatcttatccctgatcaggaaagg
aacaaaaccgttcaaaataattaaataaaaatcaaaataataaaaaaaac
ctgaacaatttctatagtatagtctttacgcatatcttgatcagagaaga
gaaagaaacaatgtacagagggagagaaataagaactaaatataacctta
cctatttatgtcttagggaaatgtctgactgaaacagcattctttgtgta
attgacatatactaattatcagttataagtacatactaactaaaggcacc
aagcttcaatccaatgttcagaactttgtcttatatcaaaataattgcat
atttcatgactattaagtgtaattataagtggttcatgagaatatatgtt
gctaacatgtttcaggaaaaacttgtttctgttcagtttgtggtgtgcaa
agtttaaatgctaacatgtctagctccatgtttctcatttctttttgttt
tcattaattcatttatgtattcactttatcacctgatcacttcctgcctg
tcttttcctcccagttctaccctctgaccttttcatctcatttctttctg
ccattgtcctcagcaaaggagaggcacacactccccacccctaccaggtt
ccacaccactttgacacaccacgttgcatcaggactaaatgcatcctcac
ccactgaagccagacaagtcagcccatcaaggggaaaaggttccaaaagc
agagaacaaagttcaaaaggagaaaacacccagtctgatttttaggagac
ccacatttaagaccaagcttcacatctgttccatatgagtaggaggccta
ggtccagaccatgcatgctctttgatcggtagttcagtctgtgtgacctc
ccaatgggtccacatgacttagttattgtagtcctccttctggaatgctt
gacttcttgttgtaagctctctggatgacccttagctaatgggggacccc
tcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_95396528_95397624
seq2: B6Ng01-335B08.g_67_1170

seq1  GAATTCAGAGCAGGAATTCAGTAGCATTCTATCTACTTATCTAATACCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGCAGGAATTCAGTAGCATTCTATCTACTTATCTAATACCTA  50

seq1  ATATAAAAAATCAAAAACTTCCTCTTGATAGGGAGCTAGAGTCCCTGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAAAATCAAAAACTTCCTCTTGATAGGGAGCTAGAGTCCCTGAGC  100

seq1  ACTTTCCTTTTGATGTCTCTTGACCTCATCTTATCCCTGATCAGGAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCTTTTGATGTCTCTTGACCTCATCTTATCCCTGATCAGGAAAGG  150

seq1  AACAAAACCGTTCAAAATAATTAAATAAAAATCAAAATAATAAAAAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACCGTTCAAAATAATTAAATAAAAATCAAAATAATAAAAAAAAC  200

seq1  CTGAACAATTTCTATAGTATAGTCTTTACGCATATCTTGATCAGAGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACAATTTCTATAGTATAGTCTTTACGCATATCTTGATCAGAGAAGA  250

seq1  GAAAGAAACAATGTACAGAGGGAGAGAAATAAGAACTAAATATAACCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAACAATGTACAGAGGGAGAGAAATAAGAACTAAATATAACCTTA  300

seq1  CCTATTTATGTCTTAGGGAAATGTCTGACTGAAACAGCATTCTTTGTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTATGTCTTAGGGAAATGTCTGACTGAAACAGCATTCTTTGTGTA  350

seq1  ATTGACATATACTAATTATCAGTTATAAGTACATACTAACTAAAGGCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACATATACTAATTATCAGTTATAAGTACATACTAACTAAAGGCACC  400

seq1  AAGCTTCAATCCAATGTTCAGAACTTTGTCTTATATCAAAATAATTGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCAATCCAATGTTCAGAACTTTGTCTTATATCAAAATAATTGCAT  450

seq1  ATTTCATGACTATTAAGTGTAATTATAAGTGGTTCATGAGAATATATGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATGACTATTAAGTGTAATTATAAGTGGTTCATGAGAATATATGTT  500

seq1  GCTAACATGTTTCAGGAAAAACTTGTTTCTGTTCAGTTTGTGGTGTGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACATGTTTCAGGAAAAACTTGTTTCTGTTCAGTTTGTGGTGTGCAA  550

seq1  AGTTTAAATGCTAACATGTCTAGCTCCATGTTTCTCATTTCTTTTTGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAAATGCTAACATGTCTAGCTCCATGTTTCTCATTTCTTTTTGTTT  600

seq1  TCATTAATTCATTTATGTATTCACTTTATCACCTGATCACTTCCTGCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAATTCATTTATGTATTCACTTTATCACCTGATCACTTCCTGCCTG  650

seq1  TCTTTTCCTCCCAGTTCTACCCTCTGACCTTTTCATCTCATTTCTTTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCCTCCCAGTTCTACCCTCTGACCTTTTCATCTCATTTCTTTCTG  700

seq1  CCATTGTCCTCAGCAAAGGAGAGGCACACACTCCCCACCCCTACCAGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTCCTCAGCAAAGGAGAGGCACACACTCCCCACCCCTACCAGGTT  750

seq1  CCACACCACTTTGACACACCACGTTGCATCAGGACTAAATGCATCCTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCACTTTGACACACCACGTTGCATCAGGACTAAATGCATCCTCAC  800

seq1  CCACTGAAGCCAGACAAGTCAGCCCATCAAGGGGAAAAGGTTCCAAAAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAAGCCAGACAAGTCAGCCCATCAAGGGGAAAAGGTTCCAAAAGC  850

seq1  AGAGAACAAAGTTCAAAAGGAGAAAACACCCAGTCTGATTTTTAGGAGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACAAAGTTCAAAAGGAGAAAACACCCAGTCTGATTTTTAGGAGAC  900

seq1  CCACATTTAAGACCAAGCTTCACATCTGTTCCATATGAGTAGGAGGCCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTTAAGACCAAGCTTCACATCTGTTCCATATGAGTAGGAGGCCTA  950

seq1  GGTCCAGACCATGCATGCTCTTTGATCGGTAGTTCAGTCTGTGTGAACTC  1000
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGTCCAGACCATGCATGCTCTTTGATCGGTAGTTCAGTCTGTGTGACCTC  1000

seq1  CCAATGGGTCCACATGACTTAGTTA-TGTAGGTCTCCTTCTGGAATGCTT  1049
      ||||||||||||||||||||||||| |||||  |||||||||||||||||
seq2  CCAATGGGTCCACATGACTTAGTTATTGTAGTCCTCCTTCTGGAATGCTT  1050

seq1  GACT--CTGTTGTAAAGCTCT---GATGACCCTTAGCTAATGGGG--ACC  1092
      ||||   |||||| |||||||   |||||||||||||||||||||   ||
seq2  GACTTCTTGTTGT-AAGCTCTCTGGATGACCCTTAGCTAATGGGGGACCC  1099

seq1  CTCGA  1097
      |||||
seq2  CTCGA  1104