BAC Information

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BAC

Clone NameB6Ng01-335E05
Chromosome5 (Build37)
Map Location 88,395,909 - 88,396,694
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665424, LOC545767, Ugt2b35, Ugt2b36, LOC665440, Ugt2b5, LOC435848, Ugt2b37, LOC665468, Ugt2a3, LOC665476, LOC665483, LOC665494, LOC100039818, Ugt2b38, Ugt2a2, Ugt2a1, Sult1b1, Sult1d1, Sult1e1, Csn1s1, Csn2, Csn1s2a, Csn1s2b, 4930432K09Rik, EG654494, Odam, BC037156, Csn3, BC051076
Downstream gene2310003L06Rik, 4931407G18Rik, Smr1, EG665603, Smr2, LOC100039941, LOC630942, EG665615, Muc10, Amtn, LOC100039963, EG665631, Ambn, Enam, Igj, Crlz1, Rufy3, Grsf1, Mobkl1a, Dck, Mkrn1-ps1, Slc4a4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335E05.bB6Ng01-335E05.g
ACCGA120548GA120549
length1,176788
definitionB6Ng01-335E05.b B6Ng01-335E05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttattggggttatttgata
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttgtggtctt
ttggttttactgacggcgtcttttgccttgcagaagctttggagtttcat
gaggtcccatttgtcaattctcgatcttacagcacaagccattgctgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccact
ttatcctctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaagaagataggaatggatcaattcaca
ttcttctacattataacaaccagttgtgccagcaccatttgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgccaaagatccagtg
accataggtgtatgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtcactataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtcaggcatggtgattccaccagagattctttt
atccttgagaagagtttttgctatcctaggttttttgttattccagataa
atttgcagattgctctttctaattcgttgaagaattgagttggaatttta
atgggaattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttctttctttggggacttgatgtttttatcatac
agatctttcacttccttagttagagtcacgccaagatattttatattact
tgtgactattgacagggtgttgtttcctaattcttctagcctgttttatt
ctttgtatagagaagcattgaccttgtttgagttaattttaatatcagct
acttcaccgaggctgttatcagtttaggagtcctctgggtgcattttaag
gttcactatatatcaccattccgatacactctcgcaaggtgatttggacc
tccctcctttccaaatttggtaatac
gaattctcttgaagcttttcccctgcagttttctcccatccccactgaaa
atatagaaacagtcattccagcttcataggatacctgctcaggtgatatc
caggtaactgaggtaccctaacactgcatggtgccaatgggcttcctctc
tggtcctcattttattacagaagactgtttggtgaggcaagaggcttgaa
aatacttcctctaagaagttatgtgcatgtgttttatatatatatatata
tatatatatatatatatatatatatatatatatttaatatacttgtatat
aatatataaaagtatgtatataatatataatttaaaactttctagaagaa
attagatagatagatagatagatagatagatagatagaaagaaagaaaga
aaaatagatagttaacagtcttttcttccatcatgctcaaagtcagaaca
tcaaagatttagaggtcagtccatcaaataggtattcctagaactcagaa
actctggaagttcagagtttgagatgtaagactttgaccctagtaatacg
aaccttatacttgttcccagaaacagaaaagtatgggccatggtctgctc
agctccccacctctcatttccctacctcacattgcctggctctctctgag
tttctaggcccaggatgaatgtggcagcggaagttgaactttgtccatta
aggtcctcctaacattctttcatatccctactgcattgttgaagtatggt
attttgaggagcctgagtccgtgtctctgaactgtcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_88395909_88396694
seq2: B6Ng01-335E05.g_66_853

seq1  GAATTCTCTTGAAGCTTTTCCCCTGCAGTTTTCTCCCATCCCCACTGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTGAAGCTTTTCCCCTGCAGTTTTCTCCCATCCCCACTGAAA  50

seq1  ATATAGAAACAGTCATTCCAGCTTCATAGGATACCTGCTCAGGTGATATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAAACAGTCATTCCAGCTTCATAGGATACCTGCTCAGGTGATATC  100

seq1  CAGGTAACTGAGGTACCCTAACACTGCATGGTGCCAATGGGCTTCCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAACTGAGGTACCCTAACACTGCATGGTGCCAATGGGCTTCCTCTC  150

seq1  TGGTCCTCATTTTATTACAGAAGACTGTTTGGTGAGGCAAGAGGCTTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTCATTTTATTACAGAAGACTGTTTGGTGAGGCAAGAGGCTTGAA  200

seq1  AATACTTCCTCTAAGAAGTTATGTGCATGTGTTTTATATATATATATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTCCTCTAAGAAGTTATGTGCATGTGTTTTATATATATATATATA  250

seq1  TATATATATATATATATATATATATATATATATTTAATATACTTGTATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATATATATATTTAATATACTTGTATAT  300

seq1  AATATATAAAAGTATGTATATAATATATAATTTAAAACTTTCTAGAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATAAAAGTATGTATATAATATATAATTTAAAACTTTCTAGAAGAA  350

seq1  ATTAGATAGATAGATAGATAGATAGATAGATAGATAGAAAGAAAGAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATAGATAGATAGATAGATAGATAGATAGATAGAAAGAAAGAAAGA  400

seq1  AAAATAGATAGTTAACAGTCTTTTCTTCCATCATGCTCAAAGTCAGAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGATAGTTAACAGTCTTTTCTTCCATCATGCTCAAAGTCAGAACA  450

seq1  TCAAAGATTTAGAGGTCAGTCCATCAAATAGGTATTCCTAGAACTCAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGATTTAGAGGTCAGTCCATCAAATAGGTATTCCTAGAACTCAGAA  500

seq1  ACTCTGGAAGTTCAGAGTTTGAGATGTAAGAC-TTGACCCTAGTAATACG  549
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACTCTGGAAGTTCAGAGTTTGAGATGTAAGACTTTGACCCTAGTAATACG  550

seq1  AACCTTATACTTGTTCCCAGAAACAG-AAAGTATGGGCCATGGTCTGCTC  598
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AACCTTATACTTGTTCCCAGAAACAGAAAAGTATGGGCCATGGTCTGCTC  600

seq1  AGCTCCCCACCTCTCATTTCCCTACCTCACATTGCCTGGCTCTCTCTGAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCCCACCTCTCATTTCCCTACCTCACATTGCCTGGCTCTCTCTGAG  650

seq1  TTTCTAGGCCCAGGATGAATGTGGCAGCGGAAGTTGAAC-TTGTCCATTA  697
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTTCTAGGCCCAGGATGAATGTGGCAGCGGAAGTTGAACTTTGTCCATTA  700

seq1  AGGTCCTCCTAACATTCTTTCAATATCCCTACTGCATTGTTGAAGTATGG  747
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGGTCCTCCTAACATTCTTTC-ATATCCCTACTGCATTGTTGAAGTATGG  749

seq1  TATTTTGAGGAGCCTGAGTCCGTGTCTCTGAACTGTCCA  786
      |||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGAGGAGCCTGAGTCCGTGTCTCTGAACTGTCCA  788