BAC Information

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BAC

Clone NameB6Ng01-335E08
Chromosome5 (Build37)
Map Location 12,629,713 - 12,630,838
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668008, EG668011, LOC668017, EG668021, LOC623998, EG668043, LOC545732, LOC384144, LOC100041626, EG668059, Sema3d, LOC668015, LOC100042917
Downstream geneLOC668069, LOC433845, LOC625989, LOC670717, Sema3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335E08.bB6Ng01-335E08.g
ACCGA120554GA120555
length1,132485
definitionB6Ng01-335E08.b B6Ng01-335E08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctttagctctgtatcccagttttagtagtgttatttgattc
tctggagtctaacttcttgagttctttgtatatattggatattagccctc
tgtcagatgtagggttaggaaaaatccttttccagtcttccttttaaaaa
attagaagcttggagctctctaatatttgcctcagtttgaaatgatattt
gattctagctttaaagaacctatatgatcactttcatccagttagtgagt
gatggaataaatcagggtgatgttaagtgattttgtttttaccaggcact
aattgttgcagaaagtgtagagtctctctgatacttccaaactgtgtgtt
cttgggcatgccattaagatgcctacatttctttactatgcccatttgga
gtcaaaggtcactcaataggattttctgtgtgagaaaaagaaggcaattt
ttagaatgagatcagattattccctagtgacaaaaccctacatttagatc
aagagcacaagttttaaactaattaaatgctgtctctcagacagctgaag
tttaaattgttgggctgtgtaatacctgaggctttttcagccaaatggac
taatagcatcattaagtctcttttctaagttcatattcttttcatttgaa
gcaactggagcatagagtacatcttactctaagaatttggagtttataaa
attttccaaaaatatagataatagaagacattatgctaaatcacactatt
tagtaggctatctaaataattactataaaaatcataactatttacatgaa
aaagttaagtactcataatcaaaatatctagtttccatctttagaaatca
tatgtttctctagatgggaaagtctctttcttcctcactagttgtaatgt
ttgcataaggcaaacatttaatattttccccatattattttagtttggga
ggaaattctggggttaatgttacagacatcatttatgcaagagaagaaac
ccataaggaaaaggcaaggagtgggatattaaaatcaaaagaagaataat
actttggcatatttcttaactgtggtgctcaaatacaactattaagaatc
actagttattattagttctcactggaaaaaaa

atttcattttacttcacagttccttatccaagaattcagggaaagaagtc
aagagagaaacttggcaagaactgaaattgaggggatgtttcttagcact
ttctcagttgctgccttgctcagtgcaagctcacttgctcaggcacttct
gatatcaactattgaacaagaaaatctcctgtgaggctatgccagtgcct
ggcaaatatagaagtggatactcacagtcatctattggatggaatacagg
gcacccaaaggagaagctagagaaagtatccaaggagctaaaggggtctg
caaccctataggagggacaacaatatgaactaaccagtatccccagagct
cgtgtttctagctgcatatgtagcagaagatggcctagtcggccatcatt
gggaagagagataatatgccccagtacaggggaatgccaggaccaagaag
tgggagtgggtgggtaggggagcagggtgggaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_12629713_12630838
seq2: B6Ng01-335E08.b_46_1177

seq1  GAATTCTTTCTTTAGCTCTGTATCCCAGTTTTAGTAGTGTTATTTGATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTTAGCTCTGTATCCCAGTTTTAGTAGTGTTATTTGATTC  50

seq1  TCTGGAGTCTAACTTCTTGAGTTCTTTGTATATATTGGATATTAGCCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGTCTAACTTCTTGAGTTCTTTGTATATATTGGATATTAGCCCTC  100

seq1  TGTCAGATGTAGGGTTAGGAAAAATCCTTTTCCAGTCTTCCTTTTAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGATGTAGGGTTAGGAAAAATCCTTTTCCAGTCTTCCTTTTAAAAA  150

seq1  ATTAGAAGCTTGGAGCTCTCTAATATTTGCCTCAGTTTGAAATGATATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAAGCTTGGAGCTCTCTAATATTTGCCTCAGTTTGAAATGATATTT  200

seq1  GATTCTAGCTTTAAAGAACCTATATGATCACTTTCATCCAGTTAGTGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTAGCTTTAAAGAACCTATATGATCACTTTCATCCAGTTAGTGAGT  250

seq1  GATGGAATAAATCAGGGTGATGTTAAGTGATTTTGTTTTTACCAGGCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAATAAATCAGGGTGATGTTAAGTGATTTTGTTTTTACCAGGCACT  300

seq1  AATTGTTGCAGAAAGTGTAGAGTCTCTCTGATACTTCCAAACTGTGTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTGCAGAAAGTGTAGAGTCTCTCTGATACTTCCAAACTGTGTGTT  350

seq1  CTTGGGCATGCCATTAAGATGCCTACATTTCTTTACTATGCCCATTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGCATGCCATTAAGATGCCTACATTTCTTTACTATGCCCATTTGGA  400

seq1  GTCAAAGGTCACTCAATAGGATTTTCTGTGTGAGAAAAAGAAGGCAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGGTCACTCAATAGGATTTTCTGTGTGAGAAAAAGAAGGCAATTT  450

seq1  TTAGAATGAGATCAGATTATTCCCTAGTGACAAAACCCTACATTTAGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATGAGATCAGATTATTCCCTAGTGACAAAACCCTACATTTAGATC  500

seq1  AAGAGCACAAGTTTTAAACTAATTAAATGCTGTCTCTCAGACAGCTGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCACAAGTTTTAAACTAATTAAATGCTGTCTCTCAGACAGCTGAAG  550

seq1  TTTAAATTGTTGGGCTGTGTAATACCTGAGGCTTTTTCAGCCAAATGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTGTTGGGCTGTGTAATACCTGAGGCTTTTTCAGCCAAATGGAC  600

seq1  TAATAGCATCATTAAGTCTCTTTTCTAAGTTCATATTCTTTTCATTTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCATCATTAAGTCTCTTTTCTAAGTTCATATTCTTTTCATTTGAA  650

seq1  GCAACTGGAGCATAGAGTACATCTTACTCTAAGAATTTGGAGTTTATAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGGAGCATAGAGTACATCTTACTCTAAGAATTTGGAGTTTATAAA  700

seq1  ATTTTCCAAAAATATAGATAATAGAAGACATTATGCTAAATCACACTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCAAAAATATAGATAATAGAAGACATTATGCTAAATCACACTATT  750

seq1  TAGTAGGCTATCTAAATAATTACTATAAAAATCATAACTATTTACATGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGGCTATCTAAATAATTACTATAAAAATCATAACTATTTACATGAA  800

seq1  AAAGTTAAGTACTCATAATCAAAATATCTAGTTTCCATCTTTAGAAATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTAAGTACTCATAATCAAAATATCTAGTTTCCATCTTTAGAAATCA  850

seq1  TATGTTTCTCTAGATGGGAAAGTCTCTTTCTTCCTCACTAGTTGTAATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTCTCTAGATGGGAAAGTCTCTTTCTTCCTCACTAGTTGTAATGT  900

seq1  TTGCATAAGGCAAACATTTAATATTTTCCCCATATTATTTTAGTTT-GGA  949
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTGCATAAGGCAAACATTTAATATTTTCCCCATATTATTTTAGTTTGGGA  950

seq1  GGAAATTCTGGGGTAAATGTTACAGACATCATTTATGCAAGAG-AGAAA-  997
      |||||||||||||| |||||||||||||||||||||||||||| ||||| 
seq2  GGAAATTCTGGGGTTAATGTTACAGACATCATTTATGCAAGAGAAGAAAC  1000

seq1  CCATAAGGAAAAGGCAAGGAGTGGGATATT-AAATCAAAAG-AGAAT-AT  1044
      |||||||||||||||||||||||||||||| |||||||||| ||||| ||
seq2  CCATAAGGAAAAGGCAAGGAGTGGGATATTAAAATCAAAAGAAGAATAAT  1050

seq1  AC-TTGGCATATTCTTAAACTGT-GTGCTCAAATAC-ACTAATAAGAATC  1091
      || ||||||||||  | |||||| |||||||||||| |||| ||||||||
seq2  ACTTTGGCATATTTCTTAACTGTGGTGCTCAAATACAACTATTAAGAATC  1100

seq1  ACTTAAGTTATTATTAGTTCTCACTTGGAAAAAAA  1126
      |||  ||||||||||||||||||| ||||||||||
seq2  ACT--AGTTATTATTAGTTCTCAC-TGGAAAAAAA  1132


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