BAC Information

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BAC

Clone NameB6Ng01-335M22
Chromosome5 (Build37)
Map Location 40,485,816 - 40,486,420
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC384174, Hs3st1, EG665839
Downstream geneLOC100040502
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335M22.bB6Ng01-335M22.g
ACCGA120917GA120918
length8911,034
definitionB6Ng01-335M22.b B6Ng01-335M22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagaaattgtttaggtgaaaacaattgaaatatgaagtcttttg
atagctcagtgaggccacctagctactgtagtgatgaaacttccaataat
ttcttgatatttgatcattttctttcatttattattattattttttttat
taacattccagttgttgctctcccttctcaacaccttcccatagtttctc
atcccattcctcctcccccttgcctctgagaggatgctcatccccacggt
gcctcccccttcccttaggcctcaagcctctctaggaataagcacatctt
ctccgactgaggcctaaccaggcagacctctgctatatctgtgccagggg
cctcagaccagcccatgtatgctcctggttggtggctcagtcactggaag
ttccctggggtcttcactagttgagactgttggccttcctatggggtctc
tctcccttttagcttcttcagtctttcccacaattcaatcataggggtcc
ccgaattgagtccaagagttgggtgtaagtatctgcttctgtttcagtca
gttgctggtagggcctctcagaagacagccatgccaggcacctgtctata
agcactgtagtatcagtaaagtgtcagaccttggtgtcctcccttgagat
ggatcccaagttgagccagtctttggactgcttttcattcagtctcttct
ccaccttttgccctgcagttctttagtacagaaacagttctaggtcagaa
attttgactatgcattcgtaaccctgtccctctgcttgaggccctgtcta
tttaatggaggtggactcttcgaaagttccccctccccagtgttgaacat
tttggctaaggtcacttccattgagtccttagattctctca

gaattccatttatccaatgattaaacatgttgagcatattttcatgtgct
gattgaccatttgttatgttcttttcagaattatgtactgagaacttttg
gcctgattttaaatgacagtattgaggattgtggctgagttttaaaactc
cttttgtgttctagaagttaatctcttcttaggtgaaaagcacatgtaaa
tatctccctaatccattaggttgtttttgcctgtgttgactctttccttt
gctgtgatcaagtgttcagtttgacatcattccatttacatttccccttt
gcctacactttgagagtcttaaaaatcaactgcctacggtgatatattaa
aagtccttcagttatgtcttcacaagtatatgtatatttatattttttca
agacagggtttctctatatagccctggctgtcctggaactcactctgtag
accaggctggccttgaactcagaaatccaactgcctctgtctcccaagtg
ctgggattaaaggcttgagccaccactgcctggcatagctttatatttta
agataagttggtttatgtgaattgtttaagatagaggtcagccttagcta
ttcttcacaagggcattcaattttcccatcactatttcttaaatagacct
taagtgttgtgtccggccagcagaccacaacctgggttctagcctggaaa
ggcattttggaaacctggaagagaagaggggctaggtggcgagagaaaag
aatgtagccaagacagttactctgatcaaggctcaaattttattgttgcg
acactggttatgaaaggaaggggggaggggacccgattcccgccgaataa
tctctggtccagtagaaaggtgcacgtgtgtggctccgcaggttccagca
gtgggcgtggcagaacgaatgagcaggaagctccaccccgagcaagcagt
ttcaggctaggggaggggagactacacttaagttctgcaatgtatatttt
actcatttgtcaaatcagtagatcaggtgggcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_40485816_40486420
seq2: B6Ng01-335M22.b_46_650 (reverse)

seq1  GTGCTTATAGACAGGTGCCTGGCATGGCTGTCTTCTGAGAGGCCCTACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTATAGACAGGTGCCTGGCATGGCTGTCTTCTGAGAGGCCCTACCA  50

seq1  GCAACTGACTGAAACAGAAGCAGATACTTACACCCAACTCTTGGACTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGACTGAAACAGAAGCAGATACTTACACCCAACTCTTGGACTCAA  100

seq1  TTCGGGGACCCCTATGATTGAATTGTGGGAAAGACTGAAGAAGCTAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGGGACCCCTATGATTGAATTGTGGGAAAGACTGAAGAAGCTAAAAG  150

seq1  GGAGAGAGACCCCATAGGAAGGCCAACAGTCTCAACTAGTGAAGACCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAGACCCCATAGGAAGGCCAACAGTCTCAACTAGTGAAGACCCCA  200

seq1  GGGAACTTCCAGTGACTGAGCCACCAACCAGGAGCATACATGGGCTGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACTTCCAGTGACTGAGCCACCAACCAGGAGCATACATGGGCTGGTC  250

seq1  TGAGGCCCCTGGCACAGATATAGCAGAGGTCTGCCTGGTTAGGCCTCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCCCTGGCACAGATATAGCAGAGGTCTGCCTGGTTAGGCCTCAGT  300

seq1  CGGAGAAGATGTGCTTATTCCTAGAGAGGCTTGAGGCCTAAGGGAAGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGAAGATGTGCTTATTCCTAGAGAGGCTTGAGGCCTAAGGGAAGGGG  350

seq1  GAGGCACCGTGGGGATGAGCATCCTCTCAGAGGCAAGGGGGAGGAGGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCACCGTGGGGATGAGCATCCTCTCAGAGGCAAGGGGGAGGAGGAAT  400

seq1  GGGATGAGAAACTATGGGAAGGTGTTGAGAAGGGAGAGCAACAACTGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGAGAAACTATGGGAAGGTGTTGAGAAGGGAGAGCAACAACTGGAA  450

seq1  TGTTAATAAAAAAAATAATAATAATAAATGAAAGAAAATGATCAAATATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATAAAAAAAATAATAATAATAAATGAAAGAAAATGATCAAATATC  500

seq1  AAGAAATTATTGGAAGTTTCATCACTACAGTAGCTAGGTGGCCTCACTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATTATTGGAAGTTTCATCACTACAGTAGCTAGGTGGCCTCACTGA  550

seq1  GCTATCAAAAGACTTCATATTTCAATTGTTTTCACCTAAACAATTTCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCAAAAGACTTCATATTTCAATTGTTTTCACCTAAACAATTTCTTG  600

seq1  AATTC  605
      |||||
seq2  AATTC  605


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