BAC Information

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BAC

Clone NameB6Ng01-341B08
Chromosome5 (Build37)
Map Location 94,753,486 - 94,754,526
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC632115, EG330129, LOC100040885, LOC666064, LOC100040909, C87414, LOC666075, LOC666077, LOC666081, EG665802, LOC100040408, LOC100040981, EG622719, LOC100041003, BC061212, EG622744, LOC100041032, LOC100041042, LOC624421
Downstream geneAA792892, LOC665521, LOC665551, LOC100041102, LOC665560, LOC100041115, LOC624507, LOC621203, LOC100041153, LOC665499, LOC624698, LOC100041179, LOC624655, LOC100041166, LOC665469, LOC622894, EG666121, LOC666125, EG666133, LOC100041296, LOC100041253, LOC100041264, EG624049
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341B08.bB6Ng01-341B08.g
ACCGA124574GA124575
length1,2011,041
definitionB6Ng01-341B08.b B6Ng01-341B08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgttt
ttctggagcccaccttcttgaattctttatatatatatattggatattag
tcctctatctgatttaggataggtaaagatcctttgccaatctgttgatg
gtctttttgtcttgttgatggtgtcttttgccttgcagaagctttgcaac
tttatgaggtcccatttattgattctcgatcttaacggcacaagctgttg
ctgttttttccggaacatttcccctgtacccatatctttgaggcttttct
ctactttctcctctataagtttcagtgtctctggttttatgtggagttcc
ttaatccacttagatttgaccttagtataaggagataggaatggatcaat
tcacattcttctccatgataaccgccagttgtgccagcaccatttgttga
aaatgctgtcttttttccactggatgcttttagctcccttgtcaaagatc
aagtgaccataggtgtgtgggatcaggtgacagcagatgctggcgaggat
atggataaagaggaacactcctccaaggttggtgggatttcaagcttgaa
caaccactctggaaatcagtctggcagtttctcagaaaactggatatagt
actaccggaggatcctgcaatacctctcttgggcatatatccagaagatg
ttccaaccggtaagaaggacacatgctccactatgttcatagcagcctta
tttattatagccagaagctggaaagaacccagatgtcccttaacagagga
atggatacagaaaatgtggcacatttacacaatggagtactactccgcta
ttaaaaagaatgaatttatgaaattcctaggcaaatggatgtacctggag
ggcatcatattgaatgaagtaacccaataaccaaaggaactcacacaata
tgtactcactgatagaggatattagcccagaaacttaggatacccaagaa
tataagaatacaatttgctagacgcatgaaacctcaagatgaacgaagac
taaagtgtggacacctttgctccttctttagaattgggaaccatatacac
ccatgggaaggagttacagagacacaggtgggagcgtgggagaaagagat
gggaccatctatgagctcgcatatactcacggtttccatctctcataaac
t
gaattctcacctgagaaataccgaatggcagagaagcaccttaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcaaaccagtcagaatggctgagatcaaaaattcattttccat
tctttacgctgccattttttcctattgatgctgtcttttgccttacagag
gatattcagtttcatgaagcccatttattgttgatcttaatgcataagct
agggttgttctgtgcagtaattagtcaacttttacaataactttgagagc
cctgacaccattaatgatattcttcaaccagtagcatttaggagtggagg
atatcaaactatttacagtactagtgttttgttttcctctaatctaattg
tgactgtgccccttttcttttctcttgaagtaaaaagtatttcatatgca
agagccaccatgagctatagcctaaaaaggaagctcctgttactcgaaac
tagggatcactgagcaagagtgagggagagtgactggcatttctttcttt
tcctttctttccttttctttttttgatattatatttattagatatttttt
atttacatttcaaatgttaccccctttcctagtttctcctccaaaaatcc
cctatctcctacccctccccatggtcaagagcccacccactcccattgct
tgtcctggcaatcccctatattgaagcagagagtcttcccaggaccaagg
gtctctcctcccattgatgactgactaggcaatcctctgctacaaatata
gctagagcctcaagttccaccatgtgttttctttggttggtggtatagct
ccaagtagctctaagtgtactggttagttcatattgatgttccttctatg
aggcttcagtccccttcagctccctggctatttctctggctcatccagtg
gggaccttgtgctccgtccaatagaaaacttatgagcattcactcctgta
tttgccaggcactggcagagcctcgcagagaaagctatatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_94753486_94754526
seq2: B6Ng01-341B08.g_73_1113

seq1  GAATTCTCACCTGAGAAATACCGAATGGCAGAGAAGCACCTTAAAAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGAAATACCGAATGGCAGAGAAGCACCTTAAAAAAAT  50

seq1  GTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGA  100

seq1  TTCCACCTCAAACCAGTCAGAATGGCTGAGATCAAAAATTCATTTTCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACCTCAAACCAGTCAGAATGGCTGAGATCAAAAATTCATTTTCCAT  150

seq1  TCTTTACGCTGCCATTTTTTCCTATTGATGCTGTCTTTTGCCTTACAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACGCTGCCATTTTTTCCTATTGATGCTGTCTTTTGCCTTACAGAG  200

seq1  GATATTCAGTTTCATGAAGCCCATTTATTGTTGATCTTAATGCATAAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTCAGTTTCATGAAGCCCATTTATTGTTGATCTTAATGCATAAGCT  250

seq1  AGGGTTGTTCTGTGCAGTAATTAGTCAACTTTTACAATAACTTTGAGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTGTTCTGTGCAGTAATTAGTCAACTTTTACAATAACTTTGAGAGC  300

seq1  CCTGACACCATTAATGATATTCTTCAACCAGTAGCATTTAGGAGTGGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACACCATTAATGATATTCTTCAACCAGTAGCATTTAGGAGTGGAGG  350

seq1  ATATCAAACTATTTACAGTACTAGTGTTTTGTTTTCCTCTAATCTAATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAAACTATTTACAGTACTAGTGTTTTGTTTTCCTCTAATCTAATTG  400

seq1  TGACTGTGCCCCTTTTCTTTTCTCTTGAAGTAAAAAGTATTTCATATGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTGCCCCTTTTCTTTTCTCTTGAAGTAAAAAGTATTTCATATGCA  450

seq1  AGAGCCACCATGAGCTATAGCCTAAAAAGGAAGCTCCTGTTACTCGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCACCATGAGCTATAGCCTAAAAAGGAAGCTCCTGTTACTCGAAAC  500

seq1  TAGGGATCACTGAGCAAGAGTGAGGGAGAGTGACTGGCATTTCTTTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGATCACTGAGCAAGAGTGAGGGAGAGTGACTGGCATTTCTTTCTTT  550

seq1  TCCTTTCTTTCCTTTTCTTTTTTTGATATTATATTTATTAGATATTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTTTCCTTTTCTTTTTTTGATATTATATTTATTAGATATTTTTT  600

seq1  ATTTACATTTCAAATGTTACCCCCTTTCCTAGTTTCTCCTCCAAAAATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACATTTCAAATGTTACCCCCTTTCCTAGTTTCTCCTCCAAAAATCC  650

seq1  CCTATCTCCTACCCCTCCCCATGGTCAAGAGCCCACCCACTCCCATTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCTCCTACCCCTCCCCATGGTCAAGAGCCCACCCACTCCCATTGCT  700

seq1  TGTCCTGGCAATCCCCTATATTGAAGCAGAGAGTCTTCCCAGGACCAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGGCAATCCCCTATATTGAAGCAGAGAGTCTTCCCAGGACCAAGG  750

seq1  GTCTCTCCTCCCATTGATGACTGACTAGGCAATCCTCTGCTACAAATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCCTCCCATTGATGACTGACTAGGCAATCCTCTGCTACAAATATA  800

seq1  GCTAGAGCCTCAAGTTCCACCATGTGTTTTCTTTGGTTGGTGGTATAGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAGCCTCAAGTTCCACCATGTGTTTTCTTTGGTTGGTGGTATAGCT  850

seq1  CCAAGTAGCTCTAAGTGTACTGGTTAGTTCATATTGATGTTCCTTCTATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTAGCTCTAAGTGTACTGGTTAGTTCATATTGATGTTCCTTCTATG  900

seq1  AGGCTTCAGTCCCCTTCAGCTCCCTGGCTATTTCTCTGGCTCATCCAGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCAGTCCCCTTCAGCTCCCTGGCTATTTCTCTGGCTCATCCAGTG  950

seq1  GGGACCTTGTGCTCCGTCCAATAGAAAAC-TATGAGCATTCACTTCTGTA  999
      ||||||||||||||||||||||||||||| |||||||||||||| |||||
seq2  GGGACCTTGTGCTCCGTCCAATAGAAAACTTATGAGCATTCACTCCTGTA  1000

seq1  TTTGCCAGGCACTGGCAGAGCCTCGCAGGAGACAGCTATATC  1041
      ||||||||||||||||||||||||||| |||| |||||||||
seq2  TTTGCCAGGCACTGGCAGAGCCTCGCA-GAGAAAGCTATATC  1041