BAC Information

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BAC

Clone NameB6Ng01-341F21
Chromosome5 (Build37)
Map Location 4,423,495 - 4,424,584
singlet/doubletsinglet
Overlap genenone
Upstream geneCdk6, 5830415L20Rik, 1700109H08Rik, C030048B08Rik, Pex1, Gatad1, 4930511M11Rik, Ankib1, Krit1, 4932412H11Rik, LOC100041009, LOC667617, Mterf, Akap9, Cyp51, ENSMUSG00000053178, LOC100041073
Downstream geneFzd1, LOC667678, Pftk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341F21.bB6Ng01-341F21.g
ACCGA124770GA124771
length1,1481,092
definitionB6Ng01-341F21.b B6Ng01-341F21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccctatagggttgttttgatttgcatttccctgatgactaacaat
attgaacatttctttaggtgcttctcgatcattcgagtttcctcagttga
gaattctgtttagctcagtatcgcattttcatagggttatctgattgtct
ggagtctaatttcttgagttctttgtatatattggatattagccctctat
cagatgtaggattggtaaagatcttttcccactctgttggctgccagatt
gtcctattgacagtgtcctttcccttacagaagctttgcaattttataaa
gtcccatttgtcaattcttgatcttagagcataagtcattggtgttctgt
tcaagaactttccctctgtgcccatgtattcgaagttcttcctcagtttt
tcttctattagtttcagtgtatttggtggaggtccttgatccacttggac
ttgagctttgtacaaggagataagaatgggtcgatttgccttcttctaca
tgctgactgacagttaaaaatgctgtcttttttcgactggatggttttaa
ctcctttgtcaaagatcaagtggccatatgtgtgtgagttcatttctggg
tcttcaattctattccattgatcttcctgcctgtctctgtaccaatacca
tacattttttaaaatcagtattgctctataatacagcttgaggtcaggga
tggtgactccccaagaagttcttttattgttgagaatagtttttgctagc
ctgagtttttattattccaaatgaatttgcaaattgattttccgaactct
ataaagaattgagttggaattttgatgagaattgcactgaatctatagat
tgctttcagcaagatggccttttttactacattaatcctgccaatccatg
agcatgggagatctttccatttgagatctctttgattctttctctggaag
ttcttgtcataacagaatctttccactgcttggttagagtcacaccaaag
gttatttttatatattgttgacctattggtgaaggttgtcaatttcctaa
ttttcttttctcagcctgtttatcctgagtagaaggaagctactgacttt
gctgaagttatatttatattccaagcccacttcgcctctcaagtggtt
gaattcactctgtagatcaggctggcctcgaactctgaaattcacctgcc
tctgcctcccaagtgctgggattaaaggtgtgtgccaccacgctcggctt
gagttcctgtcctgacatcagtgatggagtatgaactggggatcacaaaa
taaaacaaccctttcttcagaagtcactttgatcatgttgccttaacaat
aggaatctgaactaaggcaggagcaggtaccaggagacagagttcaacag
aaaccaaattagatactccatgttccaaatgctgagacatccaggtgggc
tggcaacacaggcagggtccagagttaaaggacagactggcctgggcatc
aaaagttcaatgacaaacactgtaacaactcagaggtagaagctcatagg
caaaggtgggagggtgaagtaaggacagagtggcttcaagttgaagttca
ggcttcagagtagctatgacaatacagatgggtatgcatcccaacaagct
gcaagtcaggaatgtccacagcacagaacattggtgcttgtctgatttca
gaagaagtgagacaggttatggccagcccttgtgtgggaaaggtagtgat
gtacaattttgcaggtgatcttggccatcacatgagaaaatttccagagc
tggcagggtcttgaagtaaggctaccttctcagagtccttggttttgaga
gggcatgttagtttttcttatggcttaatctgaaatccttaggcccctct
ctctccttcactcttctatccattgaatttcaaattaataattcagcttg
aaattgtgaaagtcgcagcatcatctgtggaactcaggcaggttatgcaa
tcacacttccagtgaacatttgagtgcgcctgcgaaacatgtcagattgg
acgtgtaatattaagaggggtagacatttgtcaccagtgccttttgagta
ctgagatgtggcctatgtaattgagtacttgaatttaatgattttaaact
tccaattattgtaataaaatgatgtagtatattttatttttttctttaca
aacagtttattcagaactgcattttacctttaaccagagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_4423495_4424584
seq2: B6Ng01-341F21.g_67_1158

seq1  GAATTCACTCTGTAGATCAGGCTGGCCTCGAACTCTGAAATTCACCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGATCAGGCTGGCCTCGAACTCTGAAATTCACCTGCC  50

seq1  TCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGTGCCACCACGCTCGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGTGCCACCACGCTCGGCTT  100

seq1  GAGTTCCTGTCCTGACATCAGTGATGGAGTATGAACTGGGGATCACAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCTGTCCTGACATCAGTGATGGAGTATGAACTGGGGATCACAAAA  150

seq1  TAAAACAACCCTTTCTTCAGAAGTCACTTTGATCATGTTGCCTTAACAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAACCCTTTCTTCAGAAGTCACTTTGATCATGTTGCCTTAACAAT  200

seq1  AGGAATCTGAACTAAGGCAGGAGCAGGTACCAGGAGACAGAGTTCAACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATCTGAACTAAGGCAGGAGCAGGTACCAGGAGACAGAGTTCAACAG  250

seq1  AAACCAAATTAGATACTCCATGTTCCAAATGCTGAGACATCCAGGTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAATTAGATACTCCATGTTCCAAATGCTGAGACATCCAGGTGGGC  300

seq1  TGGCAACACAGGCAGGGTCCAGAGTTAAAGGACAGACTGGCCTGGGCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAACACAGGCAGGGTCCAGAGTTAAAGGACAGACTGGCCTGGGCATC  350

seq1  AAAAGTTCAATGACAAACACTGTAACAACTCAGAGGTAGAAGCTCATAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTCAATGACAAACACTGTAACAACTCAGAGGTAGAAGCTCATAGG  400

seq1  CAAAGGTGGGAGGGTGAAGTAAGGACAGAGTGGCTTCAAGTTGAAGTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTGGGAGGGTGAAGTAAGGACAGAGTGGCTTCAAGTTGAAGTTCA  450

seq1  GGCTTCAGAGTAGCTATGACAATACAGATGGGTATGCATCCCAACAAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCAGAGTAGCTATGACAATACAGATGGGTATGCATCCCAACAAGCT  500

seq1  GCAAGTCAGGAATGTCCACAGCACAGAACATTGGTGCTTGTCTGATTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTCAGGAATGTCCACAGCACAGAACATTGGTGCTTGTCTGATTTCA  550

seq1  GAAGAAGTGAGACAGGTTATGGCCAGCCCTTGTGTGGGAAAGGTAGTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGTGAGACAGGTTATGGCCAGCCCTTGTGTGGGAAAGGTAGTGAT  600

seq1  GTACAATTTTGCAGGTGATCTTGGCCATCACATGAGAAAATTTCCAGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAATTTTGCAGGTGATCTTGGCCATCACATGAGAAAATTTCCAGAGC  650

seq1  TGGCAGGGTCTTGAAGTAAGGCTACCTTCTCAGAGTCCTTGGTTTTGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGGTCTTGAAGTAAGGCTACCTTCTCAGAGTCCTTGGTTTTGAGA  700

seq1  GGGCATGTTAGTTTTTCTTATGGCTTAATCTGAAATCCTTAGGCCCCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATGTTAGTTTTTCTTATGGCTTAATCTGAAATCCTTAGGCCCCTCT  750

seq1  CTCTCCTTCACTCTTCTATCCATTGAATTTCAAATTAATAATTCAGCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTTCACTCTTCTATCCATTGAATTTCAAATTAATAATTCAGCTTG  800

seq1  AAATTGTGAAAGTCGCAGCATCATCTGTGGAACTCAGGCAGGTTATGCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTGAAAGTCGCAGCATCATCTGTGGAACTCAGGCAGGTTATGCAA  850

seq1  TCACAC-TCCAGTGAACA-TTGAGTGCGCCTGCGAAACATGTCAGATTGG  898
      |||||| ||||||||||| |||||||||||||||||||||||||||||||
seq2  TCACACTTCCAGTGAACATTTGAGTGCGCCTGCGAAACATGTCAGATTGG  900

seq1  ACGTGTAATA-TAAGA-GGGTAGACATTTGCCACCAGTGCCTTTTGAGTA  946
      |||||||||| ||||| ||||||||||||| |||||||||||||||||||
seq2  ACGTGTAATATTAAGAGGGGTAGACATTTGTCACCAGTGCCTTTTGAGTA  950

seq1  CTTGAGATGTGG-CTATGTAATTGAGTACTTGAAATTTTAATGATTTTAA  995
      | |||||||||| |||||||||||||||||||||  ||||||||||||||
seq2  C-TGAGATGTGGCCTATGTAATTGAGTACTTGAA--TTTAATGATTTTAA  997

seq1  ACTTTCAATTATTGTAAATAAAAATGATGTAGTATATTTTATTTTTCT-T  1044
      |||| ||||||||||||   |||||||||||||||||||||||||| | |
seq2  ACTTCCAATTATTGTAA--TAAAATGATGTAGTATATTTTATTTTTTTCT  1045

seq1  TTACAAACAAATTTATCAGAACTGCATTTTA-CTTTAACCAGAGAAA  1090
      |||||||||  ||  |||||||||||||||| |||||||||||||||
seq2  TTACAAACAGTTTATTCAGAACTGCATTTTACCTTTAACCAGAGAAA  1092