BAC Information

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BAC

Clone NameB6Ng01-343E07
Chromosome5 (Build37)
Map Location 18,720,489 - 18,721,291
singlet/doubletsinglet
Overlap gene4921504A21Rik
Upstream geneGnai1, LOC100041818, LOC668167
Downstream geneMagi2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343E07.bB6Ng01-343E07.g
ACCGA126090GA126091
length803494
definitionB6Ng01-343E07.b B6Ng01-343E07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctactcagaaataccaggaaatttaaaaaaatgtatttttgagtt
tggtggactatgaactaatgatgaaagactggcaggctgtaaataataag
agacaaaaagagttaaagggggcaagtcagatactaatgttcaagcagca
atactatgtgtagattgagtgaggaaaaaaaaagtatgtgtctcaggatc
cagaaagtattattctagcttattttatggatacattcaacataataatg
aagacattagtttctcagtggataacctattaagatatataaaaatagga
aaagctatttgcaaaacacaagacaatcaagaagaggaaagaccaacggg
tggatacttcattcctccttagaatagggaacaaaacacccatgaaagga
gttacagagacaaagtttggagctaagacgaaaggatggattatccagag
actctcccacccaggaatccatcccgtaatcaaccaccaaacccagacac
tattgcatatgccagcaagattttgctgaagggaccctggtatagctgtc
ttgtatgaggctatgccagtgcctggcaaatacagaaatggatgctgaca
gtcatctctaagaggaaacacaaggcacccaatggagaagctagagaaag
tacccaaggaactgaaggggtgggcaaccctataggtggagcaataatat
gaactaaccagtactcccagagcttgtgtctctagctgcatatgtagcag
aagatggcctagtcggccatcactggaaagagaggtcccttggtattgca
aaa

tttgtttagctctgagccccattttttaatggggttatttgattttctgg
agtccactttcttgagttctttatatatattgaatattagtcccctatct
gatttaggataggtaaaggtcctttcccaatctgttggtggtctttttgt
cttattaacggtgtcttttgccttgcagaagctttgcaattttatgaggt
gccatttgtcaattcttgatcttacagcacaagccattgctgttctattc
aggaattttcccctgggatacccaatatataagatacaatttgctaaatg
catgaaactcaagaagaatgaagaacaacattatgaactaaccagtaccc
cggagctcttaactctagctgcatatgtatcaaaagatggcctagttggc
catcactggaaagagaggcccattggacttgcaaactttatatgccccag
tacaggggaacgccagggccaaaaagtgggagtgggtgggtagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_18720489_18721291
seq2: B6Ng01-343E07.b_45_847

seq1  GAATTCTACTCAGAAATACCAGGAAATTTAAAAAAATGTATTTTTGAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTCAGAAATACCAGGAAATTTAAAAAAATGTATTTTTGAGTT  50

seq1  TGGTGGACTATGAACTAATGATGAAAGACTGGCAGGCTGTAAATAATAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGACTATGAACTAATGATGAAAGACTGGCAGGCTGTAAATAATAAG  100

seq1  AGACAAAAAGAGTTAAAGGGGGCAAGTCAGATACTAATGTTCAAGCAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAAAGAGTTAAAGGGGGCAAGTCAGATACTAATGTTCAAGCAGCA  150

seq1  ATACTATGTGTAGATTGAGTGAGGAAAAAAAAAGTATGTGTCTCAGGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTATGTGTAGATTGAGTGAGGAAAAAAAAAGTATGTGTCTCAGGATC  200

seq1  CAGAAAGTATTATTCTAGCTTATTTTATGGATACATTCAACATAATAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGTATTATTCTAGCTTATTTTATGGATACATTCAACATAATAATG  250

seq1  AAGACATTAGTTTCTCAGTGGATAACCTATTAAGATATATAAAAATAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATTAGTTTCTCAGTGGATAACCTATTAAGATATATAAAAATAGGA  300

seq1  AAAGCTATTTGCAAAACACAAGACAATCAAGAAGAGGAAAGACCAACGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTATTTGCAAAACACAAGACAATCAAGAAGAGGAAAGACCAACGGG  350

seq1  TGGATACTTCATTCCTCCTTAGAATAGGGAACAAAACACCCATGAAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATACTTCATTCCTCCTTAGAATAGGGAACAAAACACCCATGAAAGGA  400

seq1  GTTACAGAGACAAAGTTTGGAGCTAAGACGAAAGGATGGATTATCCAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGAGACAAAGTTTGGAGCTAAGACGAAAGGATGGATTATCCAGAG  450

seq1  ACTCTCCCACCCAGGAATCCATCCCGTAATCAACCACCAAACCCAGACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCCACCCAGGAATCCATCCCGTAATCAACCACCAAACCCAGACAC  500

seq1  TATTGCATATGCCAGCAAGATTTTGCTGAAGGGACCCTGGTATAGCTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCATATGCCAGCAAGATTTTGCTGAAGGGACCCTGGTATAGCTGTC  550

seq1  TTGTATGAGGCTATGCCAGTGCCTGGCAAATACAGAAATGGATGCTGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATGAGGCTATGCCAGTGCCTGGCAAATACAGAAATGGATGCTGACA  600

seq1  GTCATCTCTAAGAGGAAACACAAGGCACCCAATGGAGAAGCTAGAGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCTCTAAGAGGAAACACAAGGCACCCAATGGAGAAGCTAGAGAAAG  650

seq1  TACCCAAGGAACTGAAGGGGTGGGCAACCCTATAGGTGGAGCAATAATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAAGGAACTGAAGGGGTGGGCAACCCTATAGGTGGAGCAATAATAT  700

seq1  GAACTAACCAGTACTCCCAGAGCTTGTGTCTCTAGCTGCATATGTAGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAACCAGTACTCCCAGAGCTTGTGTCTCTAGCTGCATATGTAGCAG  750

seq1  AAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGTCCCTTGGTATTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGTCCCTTGGTATTGCA  800

seq1  AAA  803
      |||
seq2  AAA  803


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