BAC Information

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BAC

Clone NameB6Ng01-344E04
Chromosome9 (Build37)5 (Build37)
Map Location 11,998,292 - 11,999,058126,737,165 - 126,737,207
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100039989
Downstream geneLOC622505, LOC100039680, LOC665285
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344E04.bB6Ng01-344E04.g
ACCGA126798GA126799
length767881
definitionB6Ng01-344E04.b B6Ng01-344E04.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(11,998,292 - 11,999,058)(126,737,165 - 126,737,207)
sequence
gaattcatgttacaatactaagatagtaatcttagtttactggatgttta
tggatatttgggttgtattgatctataatatctttaatatcacaaataat
gtttcagagactatgctgcttctcctcttctcgtcttgtcctgttgatct
cagttggtgaagctggtagagtaagtttggagatgtggctttgctggaga
atgtatgtcagtgtggatgtgatttatggtttaaatagtcaagcagagtc
cccagttagtgcactcctcctgccttctgcttgaagtccagatgtgaaag
ctcaactgtcctgccaccaagtctgctgcctgctggcaagattaccttcc
ttgatgggttcttatccctatggaactgtgagcccaaacaaagcctgcct
tcctcgggttgctttggttatggcattttattaaggcaacagaaaagtag
ctgatacacctcttctcttgtttctcctcccccctcaccccacccccacc
ctctccttgctttcctcccacttcttttcctttgttgctttttttccccc
tggcagtcccactaatttaaaagtttaaagttctttctagcctcaagtta
ttactaacccaatgcaacactgctcctctattgtatctactttgaatttc
caaactttggtccctagtttcaaaagtataagttaactggctagccatag
aagttaattgctaatttctaaatacaggcagtcagcaagagacttggtta
ctggggggggggggggg

gaattccagtacaaaatttaataggtagggagagaatgggcagccttatc
tagtccctgattttagtgggattgcttcatatttctctccatttagtttg
atgttggctattggtttgctgtatattgcttttactatgtttagatacag
gacttaaatgcctgatcttccctagacttttaccatgaagcggtgttgaa
ttttgccaaatgctttctcagcttctaatgagattatcatgtggattttt
tccctctgaatttgtttatgtagtgattatgtagttgtatttctgagtat
tgaaccttctctgcatcctgggacgaaatctacttgatcatgatgaacca
tggttgtgatgtgttcctggatctcgtttgtgagaattttatttttgcat
tgatattaataagggaaattggtctgaagttctcatcctttgttggatct
ttgtgtggtttaggtataagcatagctgtaacttcataggatgaattggg
tagtgttccttctctttctattttgtgaaatagtttgaaaggtattggta
ttaggtcttctttgaggtctgatagaattctgtactaaaaccatcttttt
tttttttttttttttttttttttttgttaggagacttttaataaatgctt
ctatttctttaggggacatgggactatttagatggtttttctgatcctga
tttaactttggctcctgcctagaaaattttccatttcagccaacttttcc
agttttgttgagtagaggctttttgtagtaggaactgatgacttgtttga
attttcttgggttttgtttttatgtttcctttttatttgtgatttgttaa
ttggatactgtctctgtgccagcgttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_11998292_11999058
seq2: B6Ng01-344E04.b_44_810 (reverse)

seq1  CCCCCCCCCCCCCCCAGTAACCAAGTCTCTTGCTGACTGCCTGTATTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCCCCAGTAACCAAGTCTCTTGCTGACTGCCTGTATTTAG  50

seq1  AAATTAGCAATTAACTTCTATGGCTAGCCAGTTAACTTATACTTTTGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGCAATTAACTTCTATGGCTAGCCAGTTAACTTATACTTTTGAAA  100

seq1  CTAGGGACCAAAGTTTGGAAATTCAAAGTAGATACAATAGAGGAGCAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGACCAAAGTTTGGAAATTCAAAGTAGATACAATAGAGGAGCAGTG  150

seq1  TTGCATTGGGTTAGTAATAACTTGAGGCTAGAAAGAACTTTAAACTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTGGGTTAGTAATAACTTGAGGCTAGAAAGAACTTTAAACTTTTA  200

seq1  AATTAGTGGGACTGCCAGGGGGAAAAAAAGCAACAAAGGAAAAGAAGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTGGGACTGCCAGGGGGAAAAAAAGCAACAAAGGAAAAGAAGTGG  250

seq1  GAGGAAAGCAAGGAGAGGGTGGGGGTGGGGTGAGGGGGGAGGAGAAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAGCAAGGAGAGGGTGGGGGTGGGGTGAGGGGGGAGGAGAAACAA  300

seq1  GAGAAGAGGTGTATCAGCTACTTTTCTGTTGCCTTAATAAAATGCCATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAGGTGTATCAGCTACTTTTCTGTTGCCTTAATAAAATGCCATAA  350

seq1  CCAAAGCAACCCGAGGAAGGCAGGCTTTGTTTGGGCTCACAGTTCCATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCAACCCGAGGAAGGCAGGCTTTGTTTGGGCTCACAGTTCCATAG  400

seq1  GGATAAGAACCCATCAAGGAAGGTAATCTTGCCAGCAGGCAGCAGACTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAGAACCCATCAAGGAAGGTAATCTTGCCAGCAGGCAGCAGACTTG  450

seq1  GTGGCAGGACAGTTGAGCTTTCACATCTGGACTTCAAGCAGAAGGCAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAGGACAGTTGAGCTTTCACATCTGGACTTCAAGCAGAAGGCAGGA  500

seq1  GGAGTGCACTAACTGGGGACTCTGCTTGACTATTTAAACCATAAATCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGCACTAACTGGGGACTCTGCTTGACTATTTAAACCATAAATCACA  550

seq1  TCCACACTGACATACATTCTCCAGCAAAGCCACATCTCCAAACTTACTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACTGACATACATTCTCCAGCAAAGCCACATCTCCAAACTTACTCT  600

seq1  ACCAGCTTCACCAACTGAGATCAACAGGACAAGACGAGAAGAGGAGAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCTTCACCAACTGAGATCAACAGGACAAGACGAGAAGAGGAGAAGC  650

seq1  AGCATAGTCTCTGAAACATTATTTGTGATATTAAAGATATTATAGATCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGTCTCTGAAACATTATTTGTGATATTAAAGATATTATAGATCAA  700

seq1  TACAACCCAAATATCCATAAACATCCAGTAAACTAAGATTACTATCTTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCCAAATATCCATAAACATCCAGTAAACTAAGATTACTATCTTAG  750

seq1  TATTGTAACATGAATTC  767
      |||||||||||||||||
seq2  TATTGTAACATGAATTC  767


seq1: chr5_126737165_126737207
seq2: B6Ng01-344E04.g_655_690 (reverse)

seq1  CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGATGG  43
      ||||||||||||||||||||||||||||||       ||||||
seq2  CAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------AGATGG  36


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