MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-344L13
Chromosome	5 (Build37)
Map Location	54,822,342 - 54,822,681
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100041911, Rbpj, Cckar, Tbc1d19, Stim2
Downstream gene	EG666377, LOC666380
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100041911 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041911
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Rbpj (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19664 MGI:96522
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Cckar (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12425 MGI:99478
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tbc1d19 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67249 MGI:1914499
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stim2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:116873 MGI:2151156
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666377 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666377 MGI:3645115
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 157 ESTs

name	LOC666380 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666380
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100041911 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253922 GeneID:100041911
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041911 transcript_id : XM_001478001.1

name	Rbpj (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286784 GeneID:19664 MGI:96522
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : recombination signal binding protein for immunoglobulin kappa J region transcript_id : NM_001080928.1

name	Rbpj (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124301228 GeneID:19664 MGI:96522
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : recombination signal binding protein for immunoglobulin kappa J region transcript_id : NM_009035.4

name	Rbpj (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286786 GeneID:19664 MGI:96522
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : recombination signal binding protein for immunoglobulin kappa J region transcript_id : NM_001080927.1

name	Cckar (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753305 GeneID:12425 MGI:99478
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cholecystokinin A receptor transcript_id : NM_009827.1

name	Tbc1d19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801409 GeneID:67249 MGI:1914499
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TBC1 domain family, member 19 transcript_id : NM_144517.3

name	Stim2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487384 GeneID:116873 MGI:2151156
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stromal interaction molecule 2 transcript_id : NM_001081103.1

name	EG666377 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374769 GeneID:666377 MGI:3645115
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 157 ESTs product : predicted gene, EG666377 transcript_id : XM_983460.1

name	LOC100041911 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253923 GeneID:100041911
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478051.1

name	Rbpj (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124286785 GeneID:19664 MGI:96522
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0030183 - B cell differentiation [Evidence IMP]; GO:0042742 - defense response to bacterium [Evidence IMP]; GO:0001837 - epithelial to mesenchymal transition [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0030097 - hemopoiesis [Evidence IMP]; GO:0007219 - Notch signaling pathway [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IGI]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; RBP-J kappa; recombining binding protein suppressor of hairless product : recombining binding protein suppressor of hairless isoform 3 protein_id : NP_001074397.1

name	Rbpj (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94400775 CCDS:CCDS19292.1 GeneID:19664 MGI:96522
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0030183 - B cell differentiation [Evidence IMP]; GO:0042742 - defense response to bacterium [Evidence IMP]; GO:0001837 - epithelial to mesenchymal transition [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0030097 - hemopoiesis [Evidence IMP]; GO:0007219 - Notch signaling pathway [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IGI]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; RBP-J kappa; recombining binding protein suppressor of hairless product : recombining binding protein suppressor of hairless isoform 1 protein_id : NP_033061.3

name	Rbpj (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124286787 GeneID:19664 MGI:96522
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0030183 - B cell differentiation [Evidence IMP]; GO:0042742 - defense response to bacterium [Evidence IMP]; GO:0001837 - epithelial to mesenchymal transition [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0030097 - hemopoiesis [Evidence IMP]; GO:0007219 - Notch signaling pathway [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IGI]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; RBP-J kappa; recombining binding protein suppressor of hairless product : recombining binding protein suppressor of hairless isoform 2 protein_id : NP_001074396.1

name	Cckar (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753306 CCDS:CCDS19293.1 GeneID:12425 MGI:99478
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004951 - cholecystokinin receptor activity [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007409 - axonogenesis [Evidence IMP]; GO:0030900 - forebrain development [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0001764 - neuron migration [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : cholecystokinin A receptor protein_id : NP_033957.1

name	Tbc1d19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21362289 CCDS:CCDS19294.1 GeneID:67249 MGI:1914499
definition	codon_start : 1 product : TBC1 domain family, member 19 protein_id : NP_653100.1

name	Stim2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487385 GeneID:116873 MGI:2151156
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006816 - calcium ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0051924 - regulation of calcium ion transport [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : stromal interaction molecule 2 protein_id : NP_001074572.1

name	EG666377 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374770 GeneID:666377 MGI:3645115
definition	codon_start : 1 product : hypothetical protein protein_id : XP_988554.1

name	LOC666380 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666380
definition	number : 3 pseudo : _no_value

name	LOC666380 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666380
definition	number : 2 pseudo : _no_value

name	LOC666380 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666380
definition	number : 1 pseudo : _no_value

clone name	MSMg01-478N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457A03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-156P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482D21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-154J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445A07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-151B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118B12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-382G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318I23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-290E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291K03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-534F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029P09
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-344L13.b	B6Ng01-344L13.g
ACC	GA127133	GA127134
length	1,167	337
definition	B6Ng01-344L13.b	B6Ng01-344L13.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaaatg ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat tccacatcacaccagtcagaatggctaagatcaaaaattcaggtgacagc agatgctggcaaggatgtggagaaagaggatcactcctccattgttggag ggattgcaagcttgtacaaccactctggaaatcagtccggcggttcctca aaaaactggatatagtactacaggaggatcctgcaatacctctcctgggc atatatccagaagatgccccaacaggtaaaaaggacacatgctccactat gttcatagcagccttatttataatagccagaagctggaaagaacccagat gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg gagtactactcagctatttaaaagaatgaatttatgaaattcctaggcaa atggatggacctggagggtatcatcctgagtgaggtaacccaatcacaaa ggaactcacacaatatgtactcactgataagtggatattagcccagatac tttggatacccgagatataagatacaatttgctaaacgcatgaaactgaa gaagaacgaagagcgaagtgtggacactttgccccttcttagaattggga acaaaacacgcatggaaggagttacagagacaaagtttggagctgtgtca aaaggatggatcatctagagcttgccatatccagggttccatcccataat cagcttccaaacgttgacaccattgcatatactagcaagattttgctgaa aggacccagatatagctgtctcttgtgagactatgctggggcctagcaaa cacagaagtggatgctcacagtcagctatgggatggatcacagggccccc aatggaggagctaaagaaaatacccaaggagctaaagggatctgcaacct atagttggacacattatgaactaacctgagctctgactctagctgcatat gtatcaaagaatagcctagtcgcatcactggaagagaaggcccattggac tgcaacttatatgcccagtacagggaaatgcagggcaaaaatgtagttgc gttgtaagggggaagct	agtgttttcttggaacttttctttgaacacttttgtaacttggaatttga atgttgatgctgttttttaaattagggtcctactgtgtggtctgagcttg cttggaactcaagatcctcttgcattagcctcctgagtactgggatggct ggtattcttttgagatagccagtcaaatctttaccaagtacttgagtttc aatatatacttgccccatagccacttaggatcattttaggcagttgaagt ccaggttctttatctgtgaagatgcatatatgtatatgtatatgtgtatg tgtatgtgtatgtgtatgtgtatgtgtatgtgtaaat
quality values	Open. Hide. 38 47 30 39 62 56 56 38 29 56 62 62 62 36 44 62 47 51 42 59 59 44 59 62 62 62 62 62 59 59 50 43 23 49 49 43 46 43 49 50 54 62 54 59 62 62 62 62 59 59 59 62 59 62 62 62 59 62 62 62 62 62 62 62 62 54 54 49 54 59 46 62 56 62 56 59 59 62 59 56 62 62 62 59 59 59 59 59 62 59 59 62 62 62 62 59 59 59 54 62 62 62 59 59 62 59 62 59 56 59 59 59 59 59 59 59 62 59 51 62 59 62 62 62 59 59 62 62 50 59 62 62 59 59 62 54 49 62 62 62 59 59 54 62 62 59 62 59 59 62 59 59 62 62 62 62 62 62 62 62 59 62 54 42 54 59 62 62 62 59 54 56 62 62 62 62 62 62 62 59 59 62 59 59 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 59 59 62 62 59 59 56 59 62 62 62 62 62 62 62 59 54 62 54 62 59 59 59 62 62 62 59 62 59 59 62 59 59 62 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 49 43 62 59 62 62 62 62 62 62 56 59 56 56 62 56 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 59 59 59 59 62 62 54 62 62 62 62 62 62 62 62 59 51 62 62 62 62 62 62 62 62 62 62 54 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 56 56 62 62 62 62 56 62 62 62 59 62 59 62 59 59 62 62 49 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 56 51 62 62 56 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 56 62 56 62 62 62 62 62 62 54 47 62 62 62 54 62 62 62 62 54 62 62 62 62 62 62 62 56 54 52 52 52 62 62 62 62 62 62 62 54 62 62 62 62 62 46 62 62 62 62 62 62 42 62 62 62 62 62 62 58 58 58 54 54 54 58 54 58 58 58 58 58 58 58 58 58 58 52 58 58 58 58 58 54 54 54 54 58 58 54 35 54 54 58 58 54 58 58 42 54 52 58 52 58 58 58 58 54 58 58 54 52 52 43 52 52 52 58 43 45 42 52 52 42 52 41 54 40 54 49 47 47 49 58 58 58 58 51 50 54 54 54 51 58 54 58 58 49 58 54 50 58 58 58 54 52 49 41 26 58 35 34 37 58 58 40 51 42 58 49 58 58 42 53 53 41 58 51 51 49 52 58 58 58 49 49 43 48 50 51 28 39 50 51 50 53 50 58 46 50 58 41 58 44 58 54 32 41 51 49 54 51 51 33 52 46 47 51 50 49 51 53 39 58 47 26 51 36 40 51 53 53 58 42 53 52 31 43 44 36 53 53 53 54 25 51 32 49 51 54 40 50 41 45 39 54 54 40 37 54 23 25 50 49 41 37 39 42 53 40 53 53 37 47 35 41 33 39 52 40 39 37 41 33 42 40 36 21 53 51 54 27 38 34 53 33 37 30 54 40 40 33 32 31 40 42 33 31 31 32 44 21 33 37 47 33 34 31 29 34 36 30 28 32 28 40 31 41 39 36 42 31 32 31 37 24 34 32 45 18 28 31 44 31 41 25 51 51 33 29 31 42 31 32 46 30 21 43 28 17 51 31 33 33 36 23 35 39 28 30 31 39 43 29 26 33 33 28 30 46 31 32 43 29 32 18 36 30 32 31 31 33 31 47 46 25 12 33 27 31 18 33 31 35 32 28 24 36 26 24 33 34 27 26 25 37 26 16 32 31 31 33 27 31 20 25 31 31 31 31 27 26 9 10 5 38 6 31 25 27 17 14 31 24 14 16 20 23 37 21 14 37 39 39 22 14 12 26 20 26 14 20 14 30 11 31 36 13 44 27 19 33 44 47 16 28 22 18 44 31 27 29 25 18 26 19 32 28 11 44 24 12 41 21 15 20 27 31 28 19 17 7 17 21 16 22 22 9 33 7 9 13 16 25 15 34 17 18 33 7 19 32 27 25 25 32 32 22 26 15 16 10 10 20 14 21 16 11 24 21 13 10 22 18 22 20 24 28 13 13 27 20 7 5 7 9 6 15 28 8 20 30 27 7 17 15 5 7 6 11 11 9 27 6 5 4 5 3 8 8 8 7 9 8 15 17 22 19 8 9 7 7 10 9 17 6 26 14 11 15 16 13 15 8 4 15 7 10 15 13 8 13 14 8 13 10 20 10 17 12 18 11 6 18 5 17 7 11 30 17 17 26 14 6 7 21 6 16 28 11 23 14 8 22 14 6 4 3 1 2 1 1 4 2 1 2 5 7 3 2 1 4 12 21 8 24 8 15 7 4 1 1	Open. Hide. 43 43 59 59 51 45 48 50 50 51 48 62 56 59 59 62 62 62 62 62 62 62 62 62 59 59 56 59 59 59 62 62 62 62 62 62 59 62 62 62 62 62 56 62 59 62 62 59 59 59 56 59 59 59 59 56 62 59 59 62 62 62 62 62 62 62 62 59 56 54 54 62 62 59 56 62 62 62 62 62 59 59 59 59 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 54 56 59 56 56 59 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 49 62 62 62 62 59 59 59 62 59 62 62 62 62 59 62 62 62 59 62 54 62 59 62 62 62 62 62 62 62 62 59 62 56 59 54 54 56 56 62 59 59 56 59 59 62 62 62 62 62 62 62 62 62 59 54 54 54 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 56 62 59 62 59 62 62 62 62 56 62 62 62 59 59 59 51 59 62 62 62 62 59 59 46 49 62 62 62 59 62 62 62 62 54 56 62 59 59 59 59 62 62 62 62 56 62 62 62 59 51 56 56 59 59 62 62 62 59 62 59 59 56 59 59 62 62 56 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 56 56 54 49 49 49 54 54 62 54 54 54 54 54 54 62 59 59 43 24 18 25 10 24 8 23 18 18 24

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_54822342_54822681
seq2: B6Ng01-344L13.g_66_405

seq1  GAATTCAGTGTTTTCTTGGAACTTTTCTTTGAACACTTTTGTAACTTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTTTTCTTGGAACTTTTCTTTGAACACTTTTGTAACTTGGA  50

seq1  ATTTGAATGTTGATGCTGTTTTTTAAATTAGGGTCCTACTGTGTGGTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAATGTTGATGCTGTTTTTTAAATTAGGGTCCTACTGTGTGGTCTG  100

seq1  AGCTTGCTTGGAACTCAAGATCCTCTTGCATTAGCCTCCTGAGTACTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGCTTGGAACTCAAGATCCTCTTGCATTAGCCTCCTGAGTACTGGG  150

seq1  ATGGCTGGTATTCTTTTGAGATAGCCAGTCAAATCTTTACCAAGTACTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGGTATTCTTTTGAGATAGCCAGTCAAATCTTTACCAAGTACTTG  200

seq1  AGTTTCAATATATACTTGCCCCATAGCCACTTAGGATCATTTTAGGCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCAATATATACTTGCCCCATAGCCACTTAGGATCATTTTAGGCAGT  250

seq1  TGAAGTCCAGGTTCTTTATCTGTGAAGATGCATATATGTATATGTATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCCAGGTTCTTTATCTGTGAAGATGCATATATGTATATGTATATG  300

seq1  TGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTA  340
      ||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTA  340

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information