BAC Information

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BAC

Clone NameB6Ng01-347G14
Chromosome5 (Build37)
Map Location 58,890,799 - 58,891,597
singlet/doubletsinglet
Overlap geneLOC100041385
Upstream geneEG666465, Pcdh7
Downstream geneLOC100041396, LOC666499, EG625870, LOC100041425
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347G14.bB6Ng01-347G14.g
ACCGA129017GA129018
length1,221798
definitionB6Ng01-347G14.b B6Ng01-347G14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaagtgaggaaactcaaagggctgacaagcaccttaagaaatg
ttcaacatccttagttatcagggaaatgcaaatcactataactctgcaat
tacacctcacagaagtcagaatggctaagagaaaaatctcaggtgacggc
agatactggcaaggatgtagagaaagaggaacactcctccattgctggtg
ggactgcaagctggtacaataactggggaaatcagtcttgcagtttctca
gaaaatgcaacatagtattacctgaggacccaactataccactcctgggc
atatacccaaaagatgccccaacatgcaataaggacacatgctccactat
gttcatagcagccttatttataatagccataagctggaaacaacccgatg
tccctcagcagaggaatggatgcagaaaacgtggtaatatatctatttta
tttttaactactattgctgtcttgaggactctaacagaatgggaatgtgc
agttagtagtgaccatgatgttgtttccatcctctacttaaattctcaag
ttactaatctctctacttttgttctatcatttttataagatctattcatt
tattttatttatatgagtacactgtacctattttcttttcaaatacacaa
gaaaagggcatctgatcctattacagatggctgtgagccaccatgtggct
gctgggaattgaaattaaggccactggaagagcagtcagtggtcttaacc
actgagctatctctccagcccatttctctacttctctattgaaaggaact
tcagaatcagtactgctaacgccaaaaagtagcttgagaatcttttgact
ctgtaaatccagttatgttaattaaaatatgaaattaaatctttatgatt
gcttacatttatttattctgtaatggtttttctctgttatcttgtttatt
ttcatttttctataataaatccccaggaccaaggcaacttatagaagaaa
gggtttacctgacttactgttccaggtgtagcatttcgagattgtaatgt
gagtacagactttagcatctagacagtagatgatgctccacacttgactg
aaacaagagcgagaagaacactctgcccaaaaagagccatagaattacac
tctgagactacattgaccactcgtcatcagccaacctttaggcctctccg
aattagggttatatacacctg
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttaagttctttatatatgttggataatgacttt
gttgtttgattattagaatataaaatctgtttcctagtgtttgttgtttt
gtttttgtttttgtttttttttttttttggtttttttttttttttttttt
ggtttttgagattctaagcatttaattaatttatgctacactttatttag
tttctttgttttcagacatcaaaacaaagcccctgggaaagtgtcttttt
tagtcaagctcttgtggcctatagcagagtgtggatcaaaacttggccct
cctatccaggtgctggctataaaatcttgtcaaggctaaacatgtactca
gctgttaggtgacacctcagctcccattttttaaaaaaattaggtattta
tttcatttacatttctaatgctatcccaaaagtttcccccctccagctac
ccccactcctgcttccccacccacccactcccacttcttggccctggcat
tcccctatctgaggcagataaagtttgcaggaccaatgggcctctctttc
cactgatggccaactaggccatcttctgatacatatgcagctagagacag
gagctctggggagtactgggtagttcatatttgttgtttgcaagaccctt
tagctcctttggtactttctctaactcctccatgggggcctgtgatccat
ccaatagctgacagagagcatccacttctctgtttgctaggccccggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_58890799_58891597
seq2: B6Ng01-347G14.g_68_865

seq1  GAATTCTTTGTTCAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGAAGTCCACCTTCTTAAGTTCTTTATATATGTTGGATAATGACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTCCACCTTCTTAAGTTCTTTATATATGTTGGATAATGACTTT  100

seq1  GTTGTTTGATTATTAGAATATAAAATCTGTTTCCTAGTGTTTGTTGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTGATTATTAGAATATAAAATCTGTTTCCTAGTGTTTGTTGTTTT  150

seq1  GTTTTTGTTTTTGTTTTTTTTTTTTTTTGGTTTTTTTTTTTTTTTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGTTTTTGTTTTTTTTTTTTTTTGGTTTTTTTTTTTTTTTTTTTT  200

seq1  GGTTTTTGAGATTCTAAGCATTTAATTAATTTATGCTACACTTTATTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTGAGATTCTAAGCATTTAATTAATTTATGCTACACTTTATTTAG  250

seq1  TTTCTTTGTTTTCAGACATCAAAACAAAGCCCCTGGGAAAGTGTCTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGTTTTCAGACATCAAAACAAAGCCCCTGGGAAAGTGTCTTTTT  300

seq1  TAGTCAAGCTCTTGTGGCCTATAGCAGAGTGTGGATCAAAACTTGGCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAAGCTCTTGTGGCCTATAGCAGAGTGTGGATCAAAACTTGGCCCT  350

seq1  CCTATCCAGGTGCTGGCTATAAAATCTTGTCAAGGCTAAACATGTACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCCAGGTGCTGGCTATAAAATCTTGTCAAGGCTAAACATGTACTCA  400

seq1  GCTGTTAGGTGACACCTCAGCTCCCATTTTTTAAAAAAATTAGGTATTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTAGGTGACACCTCAGCTCCCATTTTTTAAAAAAATTAGGTATTTA  450

seq1  TTTCATTTACATTTCTAATGCTATCCCAAAAGTTTCCCCCCTCCAGCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTACATTTCTAATGCTATCCCAAAAGTTTCCCCCCTCCAGCTAC  500

seq1  CCCCACTCCTGCTTCCCCACCCACCCACTCCCACTTCTTGGCCCTGGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACTCCTGCTTCCCCACCCACCCACTCCCACTTCTTGGCCCTGGCAT  550

seq1  TCCCCTATCTGAGGCAGATAAAGTTTGCAGGACCAATGGGCCTCTCTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTATCTGAGGCAGATAAAGTTTGCAGGACCAATGGGCCTCTCTTTC  600

seq1  CACTGATGGCCAACTAGGCCATCTTCTGATACATATGCAGCTAGAGACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGATGGCCAACTAGGCCATCTTCTGATACATATGCAGCTAGAGACAG  650

seq1  GAGCTCTGGGGAGTACTGGGTAGTTCATA-TTGTTGTTTGCAGGTCCCTT  699
      ||||||||||||||||||||||||||||| |||||||||||| | |||||
seq2  GAGCTCTGGGGAGTACTGGGTAGTTCATATTTGTTGTTTGCAAGACCCTT  700

seq1  TAGCTCCTTTGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCC  749
      ||||||||||||||||||||||| |||||||||  |||| ||||||||||
seq2  TAGCTCCTTTGGTACTTTCTCTAACTCCTCCAT--GGGGGCCTGTGATCC  748

seq1  ATCCAATAGCTGACTGTGAGCATCCACTTCTCTGTTTGCTAGGCCCCGGC  799
      |||||||||||||| | |||||||||||||||||||||||||||||||||
seq2  ATCCAATAGCTGACAGAGAGCATCCACTTCTCTGTTTGCTAGGCCCCGGC  798