BAC Information

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BAC

Clone NameB6Ng01-349N09
Chromosome5 (Build37)
Map Location 5,814,156 - 5,815,255
singlet/doubletsinglet
Overlap genenone
Upstream genePftk1, 1700015F17Rik, Cldn12, Gtpbp10, LOC667699, EG667705, A330021E22Rik, Steap2, Steap1, LOC727711, LOC546854
Downstream geneLOC100041208, EG435830
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349N09.bB6Ng01-349N09.g
ACCGA130704GA130705
length8091,093
definitionB6Ng01-349N09.b B6Ng01-349N09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatattgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccttgagat
tctacctcacaccactcagaatgactaagatcaaaaattcaggtgacagc
agacgctggcgaggatatggagaaagaggaacactcctccattgttggtg
tgattgcaagcttgtacaactactctggaagtcagtctggatgttcctca
gaaaattggacatagtactactggaagatccagcaatacctctcctgggt
ataataagtctcccagaagatgtcccaaccggtaagaaggacacatgctc
cactatgttcatagcagccttatttataatagccagaagttggaaagaac
ccagatgttcctcaacagaaggaacagaggaagattttgctgaagggacc
ctgatatagctgtctcgtatgaggctatgccagtgcctggcaaatacaga
agtggatgctcacagttatctataagatgcaacacagggcccccaacgga
gaagctagagaaagcccacaatgagctgaatgggtttgcaaccatatagg
tggaacaacaatatgaactaaccagtaaccccagagttcatatctctagc
tgcatgtcagaagaagatgacctagtcggccatcactgggaagagaggcc
ccttcgtattgccatctttatatgccccttgtacaggggaatgccaggac
caagaagtgggagtgggtcagtaggggagcagggctgggggagggtatag
ggatctttc

gaattctatagacagccaaaagtggtgttatcataaatgtcggagataca
actttctcaaatgcatgtgagtaaaagtagccatggaggacagaggtgat
gtatacatggagctgaaattagagctgctgtgagtcaccctgtgtgccgg
ggttaaacttatcagcaaaggccaggaaatcgaggtggggggcagggagt
tccagtagagggattggaactacaggagatagtcagaggtgggagattta
ctctggacaaactccaaggaagattgacacaggaaatcaaggagaggtaa
tttgcctcttggcagacatagtatagttttagtgggttaaatatgttaca
agctagacaggaaacaagcctaagttgtggcctaggccttttacattaat
aataagcctccaagtaattattcgggaactggggtgtaggtgggaaagcc
catggttattttgtacttttaagactgtccccttacctcaacaaattact
agcatccatgctcaggggtttggtggcgatgtagctactgtcttagagaa
aaatccaatcctgtcttccctcctaagtggagtccttcaaagttggacta
catgctgacagcagaagacagtgtcctgaggctgggcaagggtgctagaa
aagggcgtgtgaatggagcaatggattactctggcagaatcagcctggag
gcttgtgccagcacagtgccagagcagaccagcatgggtcctgtagattt
ctccttacagggcccttcttttttgtgtgtttccagtgctcttataggca
ctgtggtccctggacgatgataccagagagtggagagcagtgtgctgaag
atacagaccagagcagaagagcacagagccaggtaggaattccaggtgac
tttgccattgggaggctctgtttaaatcacaggttgaaagtagaggaaaa
gttgctgatgctttattctgcccctggatataaaaactcactgaatgggc
actgggggtcgggactctagtttggtctgggatgaccctgtgcactggaa
caataaatcctcttgctttttgcatcaatcagctccacgtggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_5814156_5815255
seq2: B6Ng01-349N09.g_66_1158

seq1  GAATTCTATAGACAGCCAAAAGTGGTGTTATCATAAATGTCGGAGATACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAGACAGCCAAAAGTGGTGTTATCATAAATGTCGGAGATACA  50

seq1  ACTTTCTCAAATGCATGTGAGTAAAAGTAGCCATGGAGGACAGAGGTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTCAAATGCATGTGAGTAAAAGTAGCCATGGAGGACAGAGGTGAT  100

seq1  GTATACATGGAGCTGAAATTAGAGCTGCTGTGAGTCACCCTGTGTGCCGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACATGGAGCTGAAATTAGAGCTGCTGTGAGTCACCCTGTGTGCCGG  150

seq1  GGTTAAACTTATCAGCAAAGGCCAGGAAATCGAGGTGGGGGGCAGGGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAACTTATCAGCAAAGGCCAGGAAATCGAGGTGGGGGGCAGGGAGT  200

seq1  TCCAGTAGAGGGATTGGAACTACAGGAGATAGTCAGAGGTGGGAGATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTAGAGGGATTGGAACTACAGGAGATAGTCAGAGGTGGGAGATTTA  250

seq1  CTCTGGACAAACTCCAAGGAAGATTGACACAGGAAATCAAGGAGAGGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGACAAACTCCAAGGAAGATTGACACAGGAAATCAAGGAGAGGTAA  300

seq1  TTTGCCTCTTGGCAGACATAGTATAGTTTTAGTGGGTTAAATATGTTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTCTTGGCAGACATAGTATAGTTTTAGTGGGTTAAATATGTTACA  350

seq1  AGCTAGACAGGAAACAAGCCTAAGTTGTGGCCTAGGCCTTTTACATTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGACAGGAAACAAGCCTAAGTTGTGGCCTAGGCCTTTTACATTAAT  400

seq1  AATAAGCCTCCAAGTAATTATTCGGGAACTGGGGTGTAGGTGGGAAAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGCCTCCAAGTAATTATTCGGGAACTGGGGTGTAGGTGGGAAAGCC  450

seq1  CATGGTTATTTTGTACTTTTAAGACTGTCCCCTTACCTCAACAAATTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTATTTTGTACTTTTAAGACTGTCCCCTTACCTCAACAAATTACT  500

seq1  AGCATCCATGCTCAGGGGTTTGGTGGCGATGTAGCTACTGTCTTAGAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCATGCTCAGGGGTTTGGTGGCGATGTAGCTACTGTCTTAGAGAA  550

seq1  AAATCCAATCCTGTCTTCCCTCCTAAGTGGAGTCCTTCAAAGTTGGACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCAATCCTGTCTTCCCTCCTAAGTGGAGTCCTTCAAAGTTGGACTA  600

seq1  CATGCTGACAGCAGAAGACAGTGTCCTGAGGCTGGGCAAGGGTGCTAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGACAGCAGAAGACAGTGTCCTGAGGCTGGGCAAGGGTGCTAGAA  650

seq1  AAGGGCGTGTGAATGGAGCAATGGATTACTCTGGCAGAATCAGCCTGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCGTGTGAATGGAGCAATGGATTACTCTGGCAGAATCAGCCTGGAG  700

seq1  GCTTGTGCCAGCACAGTGCCAGAGCAGACCAGCATGGGTCCTGTAGATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTGCCAGCACAGTGCCAGAGCAGACCAGCATGGGTCCTGTAGATTT  750

seq1  CTCCTTACAGGGCCCTTCTTTTTTGTGTGTTTCCAGTGCTCTTATAGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTACAGGGCCCTTCTTTTTTGTGTGTTTCCAGTGCTCTTATAGGCA  800

seq1  CTGTGGTCCCTGGACGATGATACCAGAGAGTGGAGAGCAGTGTGCTGAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTCCCTGGACGATGATACCAGAGAGTGGAGAGCAGTGTGCTGAAG  850

seq1  ATACAGACCAGAGCAGAAGAGCACAGAGCCAGGTAGGAATTCCAGGTGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGACCAGAGCAGAAGAGCACAGAGCCAGGTAGGAATTCCAGGTGAC  900

seq1  TTTGCCATTGGGAGGCTCTGTTTAAATCACAGGTTGAAAGTAGAGGAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCATTGGGAGGCTCTGTTTAAATCACAGGTTGAAAGTAGAGGAAAA  950

seq1  GTTGCTGATGCTTTATTCTGCCCCTGGAATATAAAAACTCACTGAATGGG  1000
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GTTGCTGATGCTTTATTCTGCCCCTGG-ATATAAAAACTCACTGAATGGG  999

seq1  CACTGGGGGTCGGGACCTCTAGTTTGGGTCTGGGATGACCCCTGTGCACT  1050
      ||||||||||||||| ||||||||| |||||||||||| |||||||||||
seq2  CACTGGGGGTCGGGA-CTCTAGTTT-GGTCTGGGATGA-CCCTGTGCACT  1046

seq1  GGAACAATAAATTCCTCTTGCTTTTTGCATCCATCCAGGCTCCACGTGGT  1100
      ||||||||||| ||||||||||||||||||| |||   ||||||||||||
seq2  GGAACAATAAA-TCCTCTTGCTTTTTGCATCAATC--AGCTCCACGTGGT  1093


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