BAC Information

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BAC

Clone NameB6Ng01-350H14
Chromosome5 (Build37)
Map Location 74,505,169 - 74,506,366
singlet/doubletsinglet
Overlap genenone
Upstream geneFryl, Ociad1, Ociad2, LOC667154, LOC100042205, C130090K23Rik, LOC627733, Dcun1d4, BC031901, Sgcb, Spata18, Usp46, 2700023E23Rik
Downstream geneRasl11b, Scfd2, Fip1l1, Lnx1, EG619945, Chic2, Gsh2, LOC100039083
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350H14.bB6Ng01-350H14.g
ACCGA131130GA131131
length1,1981,146
definitionB6Ng01-350H14.b B6Ng01-350H14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaagtatgtccaggctttatagccagtatctcaaaggaacctt
aaagctaattccttctgtgtatgatggtgcatgcctttttaatctcagca
cttgagaggcagaagcaagcagatctctgtaaattcaaggccagcctagt
ctacagaatgagttctaggacagccagagtaactttgtaagaccatgtct
caatgagaaacaaggacacaaagagaaacacaaagccaacctattaccta
tattatacaaattccaggttagaggtttgtgtaacctacataaacaataa
atacacataatacaataaacaagtatgtgttatgcaagagcatgtaaaca
acatccatcacagcagcgttcactagcccagaggaggaaccctagtcctc
atcagtaaacaaatgggtagacaaaatgcggtgtgtgaaatacagtagga
cagtgtctagccttaacaaggaagagaattctgatacgtgccacaacgtg
ggtaaatcttggctgagtgaaatagggcaaagacaaacaaaatgtgtgct
cctgcttgtagcagtgaacatggtcaaactcttggggacaggaagtagac
aggtgaaggggaccagggagatttgtttagtggtatagagttctcaattt
agaaggctgaaaaccttctggagttgtatgacattgtgtgtgtatttggt
gccacagaattgtatgcttataaatggcaaaaaaaggagatgttttatat
tatataacatttatttcctcgagacagtgtttcatgaaaccggggcaagc
ctcaaactccctatgtagccaatgatgtccttgaacttctgctcctgcct
ctaacacctccaaagtgccagcatcacatacattttaccacgcacacaca
cacacacacacacacacacacacacacacacacacacacaccacatacac
ataacacatacacaccacgtaccacaccctccccatatacacagacgcca
catatgcgcataacacacataatacatgcacgccacattacacacacaca
cacatacaccacaccacacacatacacacttcccctacacaacacagact
ccacaccacattataccacacacaccagtcattgggtataatgcaagctt
cttcagcctagatccgagggttcaggagaataatatagggaatgtttt
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgatttct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatattcattagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtagaggttttcca
gttttcttgagtataagcttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttgat
taggattttgtccctttgtcctctagtgagtctagctaagggcttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttaatttcacccctgagtttgattat
ttcctgccgtctactcctcttggtgaatttgcttcctttttttctagagc
ttttagatgtgttgtcaagctgctagtatgtgctgtctcccgtttctctg
agcactcagagctatgagttccttcttagaaatgcttcattgtgtcccaa
agtttgggtacgttgtgctcatttcataaactctaaaggtcttgagttct
tcttaatcttcttgaacaagatcattgagaagatgtgtcagtcacggagt
gcttcatctagtgtatgagatcagcttacgccatgtgctgatagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_74505169_74506366
seq2: B6Ng01-350H14.b_45_1242 (reverse)

seq1  AAAACAT--CCTATATTATTCTCCTG-ACACTCGGAATCTA-GCTGGGAA  46
      |||||||  ||||||||||||||||| || ||||| ||||| ||||    
seq2  AAAACATTCCCTATATTATTCTCCTGAACCCTCGG-ATCTAGGCTG----  45

seq1  AGGAAGCTTGCA-TATACCCAATGGCT-GTGTGTGT-GTAT-ATGTGTGT  92
      | |||||||||| ||||||||||| || |||||||| |||| ||||| ||
seq2  AAGAAGCTTGCATTATACCCAATGACTGGTGTGTGTGGTATAATGTG-GT  94

seq1  GTGGTGTCTGTG-TGTGTAGGGGGAAGGTGTGGTATGTGGTGTGGTGTGG  141
      |||| ||||||| ||||||||||  | |||| |||||| |||||||||||
seq2  GTGGAGTCTGTGTTGTGTAGGGG--AAGTGT-GTATGT-GTGTGGTGTGG  140

seq1  TGTATGTGTGTGTGTTGTGTAATGTGGCGTGCATGTA-TATGTGTGTTAT  190
      |||||||||||||| |||||||||||||||||||||| ||||||||||||
seq2  TGTATGTGTGTGTG-TGTGTAATGTGGCGTGCATGTATTATGTGTGTTAT  189

seq1  GCGCATATGTGGCGTCTGTGTATATGGGGA-GGTGTGGTACGTGGTGTGT  239
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GCGCATATGTGGCGTCTGTGTATATGGGGAGGGTGTGGTACGTGGTGTGT  239

seq1  ATGTGTTATGTGTATGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTATGTGTATGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  289

seq1  GTGTGTGTGTGTGTGTGCGTGGTAAAATGTATGTGATGCTGGCACTTTGG  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGCGTGGTAAAATGTATGTGATGCTGGCACTTTGG  339

seq1  AGGTGTTAGAGGCAGGAGCAGAAGTTCAAGGACATCATTGGCTACATAGG  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTAGAGGCAGGAGCAGAAGTTCAAGGACATCATTGGCTACATAGG  389

seq1  GAGTTTGAGGCTTGCCCCGGTTTCATGAAACACTGTCTCGAGGAAATAAA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGAGGCTTGCCCCGGTTTCATGAAACACTGTCTCGAGGAAATAAA  439

seq1  TGTTATATAATATAAAACATCTCCTTTTTTTGCCATTTATAAGCATACAA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATATAATATAAAACATCTCCTTTTTTTGCCATTTATAAGCATACAA  489

seq1  TTCTGTGGCACCAAATACACACACAATGTCATACAACTCCAGAAGGTTTT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGGCACCAAATACACACACAATGTCATACAACTCCAGAAGGTTTT  539

seq1  CAGCCTTCTAAATTGAGAACTCTATACCACTAAACAAATCTCCCTGGTCC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTCTAAATTGAGAACTCTATACCACTAAACAAATCTCCCTGGTCC  589

seq1  CCTTCACCTGTCTACTTCCTGTCCCCAAGAGTTTGACCATGTTCACTGCT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACCTGTCTACTTCCTGTCCCCAAGAGTTTGACCATGTTCACTGCT  639

seq1  ACAAGCAGGAGCACACATTTTGTTTGTCTTTGCCCTATTTCACTCAGCCA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCAGGAGCACACATTTTGTTTGTCTTTGCCCTATTTCACTCAGCCA  689

seq1  AGATTTACCCACGTTGTGGCACGTATCAGAATTCTCTTCCTTGTTAAGGC  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTACCCACGTTGTGGCACGTATCAGAATTCTCTTCCTTGTTAAGGC  739

seq1  TAGACACTGTCCTACTGTATTTCACACACCGCATTTTGTCTACCCATTTG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACTGTCCTACTGTATTTCACACACCGCATTTTGTCTACCCATTTG  789

seq1  TTTACTGATGAGGACTAGGGTTCCTCCTCTGGGCTAGTGAACGCTGCTGT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGATGAGGACTAGGGTTCCTCCTCTGGGCTAGTGAACGCTGCTGT  839

seq1  GATGGATGTTGTTTACATGCTCTTGCATAACACATACTTGTTTATTGTAT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATGTTGTTTACATGCTCTTGCATAACACATACTTGTTTATTGTAT  889

seq1  TATGTGTATTTATTGTTTATGTAGGTTACACAAACCTCTAACCTGGAATT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTATTTATTGTTTATGTAGGTTACACAAACCTCTAACCTGGAATT  939

seq1  TGTATAATATAGGTAATAGGTTGGCTTTGTGTTTCTCTTTGTGTCCTTGT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAATATAGGTAATAGGTTGGCTTTGTGTTTCTCTTTGTGTCCTTGT  989

seq1  TTCTCATTGAGACATGGTCTTACAAAGTTACTCTGGCTGTCCTAGAACTC  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATTGAGACATGGTCTTACAAAGTTACTCTGGCTGTCCTAGAACTC  1039

seq1  ATTCTGTAGACTAGGCTGGCCTTGAATTTACAGAGATCTGCTTGCTTCTG  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTAGACTAGGCTGGCCTTGAATTTACAGAGATCTGCTTGCTTCTG  1089

seq1  CCTCTCAAGTGCTGAGATTAAAAAGGCATGCACCATCATACACAGAAGGA  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCAAGTGCTGAGATTAAAAAGGCATGCACCATCATACACAGAAGGA  1139

seq1  ATTAGCTTTAAGGTTCCTTTGAGATACTGGCTATAAAGCCTGGACATACT  1189
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCTTTAAGGTTCCTTTGAGATACTGGCTATAAAGCCTGGACATACT  1189

seq1  TTTGAATTC  1198
      |||||||||
seq2  TTTGAATTC  1198