CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTCCAAAGGAGAGGGCACCACAGCCATAGGTAATCATTAGTGAACCCTC
TAACTGGGGTTAGAGGACACAAGAGCATGTGTATAAAACTAGCTGTATAT
GTAAGTTCTCTGTGTATTTGTTCCAAAATAATGCAAACTTTATTAATAGC
ATTTCTTTAGTAATAATAAACATTATCATAAAATATCCAGTTTAAAAAAA
CACATAAGTTTTATTTATCTTACAATTCTTAAAAACAAGCCTCACTGCGT
TAAAATGATAAATGAAGGAAGACTCTGAGCTTTACCCCTCACATAGAGGG
TTGGCTTCTCTGTGCTTCATTGACATATATAAGGTATTGCTACACTTGTG
AACCTACTAATGCCTTAGTCTCCTGACTCTTTCATACAATTAATCTTATG
AGTATGACAAGCTTATTGGGATATAAATAGCATAAACTTTTCACCTCACT
GTCTTTCATTTAATTGCATCACAATCATAAAGTTTAGTAGGTGGATATTT
GTAGAGGGAATATTACCCAACCTATCATACGAAGCAATCCTAACATGCAT
TATGTAACTATTTTTTCAAAAGCAGTATCACTTTCATTACTTTTTGCCTT
TGTTCAGATGGATTTGAGTTTATATGCAACTCTTCCAC

CCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAGAACTTTTCAGCTGGGGAACAGAAG
TACCAGTGAGTACAGCTTTACAAGGTAAGTCTGGTCTTGAACTTTCTAAC
GAAATTCAAGACAGTCTATCAGAAGTAAAGTGGAAAATAGCTTTACAAGG
TATGTTTGGCCTTGAACTTTCTCTAGTGTTAGAAGCCCTTTTGTTCCTTT
TCACATGTTATCAAGTGGTTAAGGCAGGGCGGATTCTGGATGAAATTCAG
GACAATCTATCAGAAGTAAAGCGGGGAGAGAGAGTAGGAGCAAAGAGGAA
ATATGGTTCACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCG
AGGAAAAGTTTAGGTCAGGTAAGAATACCTGGGGAGAGATTAGAAGGAAG
GAGAAGGAAAAAGAAAAGAAAAAAGATCAATTAGCGGAGGTCTCTAGGAG
AAGGAGCCTATACTCATCACTAGGTGAGCTCAAGGAGCCAGTTCTTAATA
GTTCTGAATCAGATGAAAAGGCTATTAGGGCCTGGAAGGCGCTCTCCCGA
GCAGGTAAAGCCACTGGACAATAATGACAGAGGCAGGCTCTTGCAGCCTA
CAAAGTCTTATTGTCCACCCTGGAGTTGTAGATCAAGATTATAT

Query= MSMg01no045_k10.b1 MSMg01no045_k10.b1 CHROMAT_FILE:
MSMg01no045_k10.b1 PHD_FILE: MSMg01no045_k10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:39 2005
         (646 letters)



>mm_chr5_70831564_70832610
          Length = 1047

 Score = 1172 bits (606), Expect = 0.0
 Identities = 633/642 (98%), Gaps = 1/642 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcc-aaaggagagggcaccacagccataggtaatcattagtgaaccctctaact 63
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcccaaaggagagggcaccacagccataggtaatcattagtgaaccctctaact 264

                                                                       
Query: 64  ggggttagaggacacaagagcatgtgtataaaactagctgtatatgtaagttctctgtgt 123
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggggttagaggacacaagaacatgtgtataaaactagctgtatatgtaagttctctgtgt 324

                                                                       
Query: 124 atttgttccaaaataatgcaaactttattaatagcatttctttagtaataataaacatta 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 325 atttgttccaaaataatgcaaactttattaatagcatttctttagtaataataaaaatta 384

                                                                       
Query: 184 tcataaaatatccagtttaaaaaaacacataagttttatttatcttacaattcttaaaaa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcataaaatatccagtttaaaaaaacacataagttttatttatcttacaattcttaaaaa 444

                                                                       
Query: 244 caagcctcactgcgttaaaatgataaatgaaggaagactctgagctttacccctcacata 303
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caagcctcgctgcgttaaaatgataaatgaaggaagactctgagctttacccctcacata 504

                                                                       
Query: 304 gagggttggcttctctgtgcttcattgacatatataaggtattgctacacttgtgaacct 363
           |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 505 gagggttggcttctctgtgcttcattgacacatataaggtattgctacacttgtgatcct 564

                                                                       
Query: 364 actaatgccttagtctcctgactctttcatacaattaatcttatgagtatgacaagctta 423
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 565 actaatgccttagtctcctgactctttcatacaagtaatcttatgagtatgacaagctta 624

                                                                       
Query: 424 ttgggatataaatagcataaacttttcacctcactgtctttcatttaattgcatcacaat 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttgggatataaatagcataaacttttcacctcactgtctttcatttaattgcatcacaat 684

                                                                       
Query: 484 cataaagtttagtaggtggatatttgtagagggaatattacccaacctatcatacgaagc 543
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cataaagtttagtaggtagatatttgtagagggaatattacccaacctatcatacgaagc 744

                                                                       
Query: 544 aatcctaacatgcattatgtaactattttttcaaaagcagtatcactttcattacttttt 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aatcctaacatgcattatgtaactattttttcaaaagcagtatcactttcattacttttt 804

                                                     
Query: 604 gcctttgttcagatggatttgagtttatatgcaactcttcca 645
           |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 805 gcctttgttcagatggatttgattttatatgcaactcttcca 846


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1047
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1037
Effective search space:   659532
Effective search space used:   659532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)