Query= MSMg01no049_d24.b1 MSMg01no049_d24.b1 CHROMAT_FILE:
MSMg01no049_d24.b1 PHD_FILE: MSMg01no049_d24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:11:04 2005
(549 letters)
>mm_chr5_50150243_50151191
Length = 949
Score = 1015 bits (525), Expect = 0.0
Identities = 543/549 (98%)
Strand = Plus / Plus
Query: 1 cctgagatttcaccttgcactaatcagaatggttgagatcaaaaactcaagcaacagcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgagatttcaccttgcactaatcagaatggttgagatcaaaaactcaagcaacagcac 260
Query: 61 atgctggtgagaatatagagaaaggggaacattcttccactgctggtcagattgccaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 atgctggtgagaatatagagaaaggggaacattcttccactgctggtcagattgcaaact 320
Query: 121 tgtacaatcactctggaaatcaatctggatgtttctcagaaaactagaaatatttctacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtacaatcactctggaaatcaatctggatgtttctcagaaaactagaaatatttctacc 380
Query: 181 tgaagaccctgctataccactcctggacatataacgaaaagatgttccaccataccacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaagaccctgctataccactcctggacatataacgaaaagatgttccaccataccacaa 440
Query: 241 ggatacaattacttaatagagatcatgtgtctattctatgtacacatttgtggtgaagag 300
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 441 ggatacaattacttaatagagatcatgtgtctattcaatgtagacatttgtggtgaagag 500
Query: 301 caaagcacaacttgtcttgagcttccaagatctgaaatagatttccagcattcacatgtt 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 501 caaagcacaacttgtcttgagcttcaaagatctgaaatagatttccagcattcacatgtt 560
Query: 361 ctctatctgatgattctcagtacattcctacttcttccctaaactttctgcttattttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctctatctgatgattctcagtacattcctacttcttccctaaactttctgcttattttca 620
Query: 421 ccatcatcctcctagtgataacactcagttccttcctctgctcacagtgactcactcagg 480
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccatcctcctcctagtgataacactcagttccttcctctgctcacagtgactcactcagg 680
Query: 481 ctgggtgtatcaagttttgttttgaaacttggggtttcaaagaccaaagatgccaaaaga 540
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgggtgtatcaagttttgtattgaaacttggggtttcaaagaccaaagatgccaaaaga 740
Query: 541 ggcctcagc 549
|||||||||
Sbjct: 741 ggcctcagc 749
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no049_d24.g1 MSMg01no049_d24.g1 CHROMAT_FILE:
MSMg01no049_d24.g1 PHD_FILE: MSMg01no049_d24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:11:04 2005
(568 letters)
>mm_chr5_50265076_50266043
Length = 968
Score = 725 bits (375), Expect = 0.0
Identities = 408/419 (97%), Gaps = 1/419 (0%)
Strand = Plus / Minus
Query: 1 taagcagaagaggccccaccaatgaacaaatgggattggatacacattattacccagaac 60
||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 419 taagcagaagaggtcccaccaatgaagaaatgggattggatacacattattacccagaac 360
Query: 61 cacatgcatgggctaagtaaaaatagaatttgttaaatgtgagaatctttagttcttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 cacatgcatgggctaagtaaaaatagaatttgttaaatgtgagaatctttagttcttttt 300
Query: 121 atctgtgtcccccttgtttatagtttttataccatcatatcattgttccattatttttat 180
||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 299 atctgtgtcccacttgtttatagtttttataccatcatgtctttgttccattatttttat 240
Query: 181 ttatgtggtgtgtgagttacatgtggtcagttgcaatcatgtagagaccagaggagtata 240
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 239 ttatgtggtgtgtgagttatatgtggtcaattgcaatcatgtagagaccagaggagtata 180
Query: 241 ttgctgtgttcttctatcacactttttttttt-ttgaggacagagtatcttactaaattt 299
|||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 179 ttgctgtgttcttctatcacacttttttttttcctgaggacagagtgtcttactaaattt 120
Query: 300 gaagtttgctattttagtcctaagctgaccagcaaatccgcaaaagccacctatctctgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 gaagtttgctattttagtcctaagctgaccagcaaatccgcaaaagccacctatctctgt 60
Query: 360 gcccccaacactggggttagaaatataaatggccatagcaagccttttacatgggcaat 418
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 gcccccaacactggagttagaaatataaatggccatagcaagccttttacatgggcaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space: 534564
Effective search space used: 534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
