Query= MSMg01no053_g06.b1 MSMg01no053_g06.b1 CHROMAT_FILE:
MSMg01no053_g06.b1 PHD_FILE: MSMg01no053_g06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:17 2005
(247 letters)
>mm_chr5_55584776_55585422
Length = 647
Score = 462 bits (239), Expect = e-135
Identities = 242/243 (99%)
Strand = Plus / Plus
Query: 5 gaattccttgttctgctcggcatgacaagttttaagaatatacttgtaaaaccaacatag 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttgttctgcttggcatgacaagttttaagaatatacttgtaaaaccaacatag 264
Query: 65 catcaaagaagacataagagagaaataaaaataattttagagtctaaatataaaatccat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catcaaagaagacataagagagaaataaaaataattttagagtctaaatataaaatccat 324
Query: 125 ataaaaatataccaaatatatatgtagtagcagtaccagctatatatgtatgtatgtatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ataaaaatataccaaatatatatgtagtagcagtaccagctatatatgtatgtatgtatg 384
Query: 185 tattgtatatatgactgtacatgtttatattggagaaagaaagaggactggagatgcaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tattgtatatatgactgtacatgtttatattggagaaagaaagaggactggagatgcaat 444
Query: 245 tta 247
|||
Sbjct: 445 tta 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no053_g06.g1 MSMg01no053_g06.g1 CHROMAT_FILE:
MSMg01no053_g06.g1 PHD_FILE: MSMg01no053_g06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:17 2005
(297 letters)
>mm_chr12_115648734_115649432
Length = 699
Score = 563 bits (291), Expect = e-165
Identities = 297/299 (99%), Gaps = 2/299 (0%)
Strand = Plus / Minus
Query: 1 caccttatgcctgccctggtgaatc-gtattcagaagag-tatacacaatatttcatgca 58
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 499 caccttatgcctgccctggtgaatcagtattcagaagagttatacacaatatttcatgca 440
Query: 59 tacaagttattcctgagtgactatagtattgcctaccaaacattttcgtgccgcatcatc 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tacaagttattcctgagtgactatagtattgcctaccaaacattttcgtgccgcatcatc 380
Query: 119 ataggagtgagttaaagaaaatgaagtcatgtatcagcttggtaaaaacaaaaggtagaa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ataggagtgagttaaagaaaatgaagtcatgtatcagcttggtaaaaacaaaaggtagaa 320
Query: 179 caatttctactgggatattatgcctatgacaattcataaatagctgttgacacgaccaac 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 caatttctactgggatattatgcctatgacaattcataaatagctgttgacacgaccaac 260
Query: 239 ctgaaaggaaatatttaaataaattagctgtgcttatcctgagtaacaggttctgttag 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ctgaaaggaaatatttaaataaattagctgtgcttatcctgagtaacaggttctgttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 699
Length adjustment: 9
Effective length of query: 288
Effective length of database: 690
Effective search space: 198720
Effective search space used: 198720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
