Query= MSMg01no053_g10.b1 MSMg01no053_g10.b1 CHROMAT_FILE:
MSMg01no053_g10.b1 PHD_FILE: MSMg01no053_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:18 2005
(325 letters)
>mm_chr11_15978082_15978809
Length = 728
Score = 582 bits (301), Expect = e-171
Identities = 322/329 (97%), Gaps = 4/329 (1%)
Strand = Plus / Plus
Query: 1 ctgctttattcc-acttactccaa-attcttttctttttaa-atttattttcaggttata 57
||||||||| | ||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 201 ctgctttatactgacttactccaacattcttttctttttaacatttattttcaggttata 260
Query: 58 ctgggggaggacaacattttctcgacactttttttttgaaattattttttttt-cttccc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 ctgggggaggacaacattttctcgacactttttttttgaaattattttttttttcttccc 320
Query: 117 ttttctctctccaaacacgctcataaatccatcctcactctccttcaaatcatggccact 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttctctctccaaacacgctcataaatccatcctcactctccttcaaatcatggccact 380
Query: 177 tatttcatgaattactgattccatgcagatatgtataaatgtgagcattcttaaatctaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatttcatgaattactgattccatgcagatatgtataaatgtgagcattcttaaatctaa 440
Query: 237 cctgctcaccaggcagtggtgtcgtatgcctttaatcccagcacttgggaggcagaggca 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctgctcaccaggcagtggtgtcgtatgcctttaatcccagcacttgggaggcagaggca 500
Query: 297 ggtgggtttctgagttgaggccatcctgg 325
||||||||||||||| |||||||||||||
Sbjct: 501 ggtgggtttctgagtcgaggccatcctgg 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 728
Length adjustment: 9
Effective length of query: 316
Effective length of database: 719
Effective search space: 227204
Effective search space used: 227204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no053_g10.g1 MSMg01no053_g10.g1 CHROMAT_FILE:
MSMg01no053_g10.g1 PHD_FILE: MSMg01no053_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:18 2005
(381 letters)
>mm_chr5_101186884_101187663
Length = 780
Score = 729 bits (377), Expect = 0.0
Identities = 380/381 (99%), Gaps = 1/381 (0%)
Strand = Plus / Plus
Query: 1 taagtatactttgctaagcttgccctgagacttctagctcctatccagtaaaatactgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taagtatactttgctaagcttgccctgagacttctagctcctatccagtaaaatactgca 260
Query: 61 agaaagcatgcaagaccctccacactattgcagggaaaaatttggagcattcgtgctatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaagcatgcaagaccctccacactattgcagggaaaaatttggagcattcgtgctatg 320
Query: 121 ggaatgccaaggttcaaggaggctgtttccatgaaacatttttgcctcagaactgcgtcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaatgccaaggttcaaggaggctgtttccatgaaacatttttgcctcagaactgcgtcc 380
Query: 181 aagcttttgggcctgccacgcagtcttcactggagtgggtgtggcacctacctaccatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagcttttgggcctgccacgcagtcttcactggagtgggtgtggcacctacctaccatcc 440
Query: 241 acattctcttgtcttcatttgaaagcccaaactcacaccctggcaaaagggtggggcatg 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acattc-cttgtcttcatttgaaagcccaaactcacaccctggcaaaagggtggggcatg 499
Query: 301 gccatgcactggcccaggaaaaactctcccaggaatctggcagtggggaccactgtgctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gccatgcactggcccaggaaaaactctcccaggaatctggcagtggggaccactgtgctt 559
Query: 361 tgatcttgaagccacaaatga 381
|||||||||||||||||||||
Sbjct: 560 tgatcttgaagccacaaatga 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 780
Length adjustment: 9
Effective length of query: 372
Effective length of database: 771
Effective search space: 286812
Effective search space used: 286812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
