TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGAAGATCCGCGGA
ATTCTTCAGTTTCCCAGTAGCTCAAGAGTCTCTTTACAAGGCAGAGGCTT
GTCTAATCAGTCAAGCACATACCTGTGCTGCTGACGGTGTGACTGAGGGC
ATCAGTCATGTTTGACACTGTGGATGACTTCACTGTACACGGTTTTTCCT
TTTGACTTATTATATTGATGACTTTAATGTTGGCTCTACGATTAAACATG
TTTCCTGTATTTTTCATCAAATAGTGTTTTGTTCCCTCCATTTTATCTTA
GTTAAAAATGAATGAATTTATACAAATGGTATCTTCTGGCCTAATCTGCC
CGAGTGTTGAATTCTTCTTTTTGAGAAATTTAGATTTTTACTTTTTAGAC
TACAAGCTCATCTGAATGTTTTTGAAAGGAACAGTATTGGGATTTTAAAA
ATATAAGCACAGATACTTTTGCAGCTGGTCATTATCTTCATGTGGTTATT
GATCTCTCTAGAATGCCAGGCCTTTTCTTTGGTAAAAGATGAGTGTAATT
CGGGACAATGACAGGAGCATCATGCATAGTTTACTTTCACACAGGAATGT
GGCCTGAATAATTGAGCCATATGTACCGATAAATTTAAGTTCATGAAGGA
CTCTCATTCACCAATATAATAAGACCAATGTCCCTCTCAGACCAAATG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAAGAATATCGAATGGCT
TAGAAGCACCTGAAAAAATGTTCAGCATCCTTAATCATCAGGGAAATGCA
AATCAAAACAACCTTGAGATTCCACCTGACACCAGTCAGAATGGTTAAGA
TCAAAAATTCAGGCGACAGCAGATGCTGGTGAGGATTGTGGAGAAAGAGG
AACACTCCTCCATTGTTGGTGGGATTGCAATCTTGTGCAACCACTCTGGA
AGTCAGTCTGGAGGTTCCTCAGAAAGTTGAACATAGCACTACTGGAGGAT
CCCGCAATACCTCTCCTGGGCATATACCCAGAAGATGCTCCAACCGGTAA
GAAGAACACATGCTCCACTATGTTCATAGCCATCTTATTTATCATATTTA
GACGCTGGCTTATTTTTTTTTCACTCCTGCATAACAACGAGTTGTGATTC
TGCTATCCACCGTCCCTTTACTCAGCTGAAATTATCAGCCCGTTGCCAGA
GCATCTTCTTTGGGCTTTTTTTCTCCCCCTTCTCCCCCTTCTTCCCCCTT
GAATTCTTCCCTCTACTTTTCTAGTGCTTTTCCTCCATTATTTTCCTATT
TCTTACCCTGTATTTCTCATTTCCGATAGAATATCCCCTGAAGACCACCC
TCGCCCCTATTCTTGGCCCCTCTGTTTTTCTTTTTT

Query= MSMg01no055_h01.b1 MSMg01no055_h01.b1 CHROMAT_FILE:
MSMg01no055_h01.b1 PHD_FILE: MSMg01no055_h01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:50 2005
         (468 letters)



>mm_chr5_68154967_68155835
          Length = 869

 Score =  814 bits (421), Expect = 0.0
 Identities = 457/469 (97%), Gaps = 1/469 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctcaagagtctctttacaaggcagaggcttgtctaatcagtcaagcacatacctgtgctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 669 ctcaagagtctctttacaaggcagaggcttgtctaatcagtcaagcacataactgtgctg 610

                                                                       
Query: 61  ctgacggtgtgactgagggcatca-gtcatgtttgacactgtggatgacttcactgtaca 119
           |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 609 ctgacggtgtgactgaggacatcaggtcatgtttgacactgtggatgacttcactgtaca 550

                                                                       
Query: 120 cggtttttccttttgacttattatattgatgactttaatgttggctctacgattaaacat 179
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tggtttttccttttgacttattatattgatgactttaatgttggctctacgattaaacat 490

                                                                       
Query: 180 gtttcctgtatttttcatcaaatagtgttttgttccctccattttatcttagttaaaaat 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gtttcctgtatttttcatcaaatagtgttttgttccctccattttatcttagttaaaaat 430

                                                                       
Query: 240 gaatgaatttatacaaatggtatcttctggcctaatctgcccgagtgttgaattcttctt 299
           ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||
Sbjct: 429 gaatgaatttatacaaatgatatcttctggcctaatctgccagagtgttgaatttttctt 370

                                                                       
Query: 300 tttgagaaatttagatttttactttttagactacaagctcatctgaatgtttttgaaagg 359
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 369 tttgagaaatttagatttttactttttagactccaagctcatctgaatgtttttgaaagg 310

                                                                       
Query: 360 aacagtattgggattttaaaaatataagcacagatacttttgcagctggtcattatcttc 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aacagtattgggattttaaaaatataagcacagatacttttgcagctggtcattatcttc 250

                                                            
Query: 420 atgtggttattgatctctctagaatgccaggccttttctttggtaaaag 468
           ||||||| | |||| | ||||||||||||||||||||||||||||||||
Sbjct: 249 atgtggtgactgatatttctagaatgccaggccttttctttggtaaaag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 869
Length adjustment: 10
Effective length of query: 458
Effective length of database: 859
Effective search space:   393422
Effective search space used:   393422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)