Query= MSMg01no055_p07.b1 MSMg01no055_p07.b1 CHROMAT_FILE:
MSMg01no055_p07.b1 PHD_FILE: MSMg01no055_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:29 2005
(387 letters)
>mm_chr5_21302836_21303622
Length = 787
Score = 690 bits (357), Expect = 0.0
Identities = 375/381 (98%)
Strand = Plus / Plus
Query: 7 ggaattcattctgtccaccaggctggccttgaactcagagatctgcctgcctctgcctcc 66
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggaattcattctgtagaccaggctggccttgaactcagagatctgcctgcctctgcctcc 266
Query: 67 cgagtgctgggattagaggtgtgcaccaccacaaatggctgatgtgtttcgtttttgagt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cgagtgctgggattagaggtgtgcaccaccacaaatggctgatgtgtttcgtttttgagt 326
Query: 127 ctgccttgcaaatatagctctggtggcctagagctatgtatgtggacgtggctgacttga 186
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 327 ctgccttgcaaatatagctctggtggcctagagctttgtatgtggacgtgactgacttga 386
Query: 187 agttggatggtcctttagtttgtgtcctgaatgctgggattacaaacctgcgatgccatg 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 agttggatggtcctttagtttgtgtcctgaatgctgggattacaaacctgcgatgccatg 446
Query: 247 cctcgcccagacccagctccaccccttttggtggatccgtcgtgttctggagcgctttct 306
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 447 cctcgcccagacccagctccaccccttttggtggatccgtcgtgttctggagtgctttct 506
Query: 307 tactgacactgagtgtgaggctgtgctttctcacgcttactgtcactgatctttacacat 366
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 507 tactgacactgagtgtgaggctgtgctttctcacgcttactgtcactgatcttgacacat 566
Query: 367 ggcttccttagggctttgaag 387
|||||||||||||||||||||
Sbjct: 567 ggcttccttagggctttgaag 587
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no055_p07.g1 MSMg01no055_p07.g1 CHROMAT_FILE:
MSMg01no055_p07.g1 PHD_FILE: MSMg01no055_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:29 2005
(171 letters)
>mm_chr5_21444866_21445435
Length = 570
Score = 308 bits (159), Expect = 2e-88
Identities = 168/171 (98%), Gaps = 1/171 (0%)
Strand = Plus / Minus
Query: 1 cgtggataaagagaagaacattccaaatcaagggatccaagtgaagtcgacaaggacacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cgtggataaagagaagaacattccaaatcaagggatccaagtgaagtcgacaaggacacg 311
Query: 61 tgggcggcgcctcagagttactgtttgacgcagtagaaagtggaaggaggtcattagtgg 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 t-ggcggcgcctcagagttactgtttgacgcagtagaaagtggaaggaggtcattagtgg 252
Query: 121 gttgggtttacttacaaaaagcattgaagcgaggtaggagaataggattca 171
|||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 251 gttgggtttacttacaaaaagcattgaagcgaggcaggagaatagggttca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 570
Length adjustment: 8
Effective length of query: 163
Effective length of database: 562
Effective search space: 91606
Effective search space used: 91606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
