Query= MSMg01no057_c24.b1 MSMg01no057_c24.b1 CHROMAT_FILE:
MSMg01no057_c24.b1 PHD_FILE: MSMg01no057_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:03 2005
(636 letters)
>mm_chr5_3679110_3680146
Length = 1037
Score = 1180 bits (610), Expect = 0.0
Identities = 628/634 (99%), Gaps = 1/634 (0%)
Strand = Plus / Plus
Query: 4 gaattcagtagatggtacctgtagctgttataattttgtttcccttgacatatggcaaaa 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcagtagatggtagctgtagctgttataattttgtttcccttgacatatggcaaaa 263
Query: 64 ctttcgtatccatattgaaatatatcagattactataaattcagaaaaagagtatcctaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctttcgtatccatattgaaatatatcagattactataaattcagaaaaagagtatcctaa 323
Query: 124 tcataagctgacgtggatttagaaggtcctcaatgctttggtgacgttttccaggtacaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcataagctgacgtggatttagaaggtcctcaatgctttggtgacgttttccaggtacaa 383
Query: 184 tttaaagctgtgagcaccagctctacataaataaagccgattgtagaaaccccc-agtac 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 384 tttaaagctgtgagcaccagctctacataaataaagccgattgtagaaaccccccagtac 443
Query: 243 tcacctttctcttcatttggacatcatgtgggcatagtttagcatgtgacctttttcttt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcacctttctcttcatttggacatcatgtgggcatagtttagcatgtgacctttttcttt 503
Query: 303 aacagaaggacaacccaaaaccttctgtctttctccctctttccacaggcagactagaga 362
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aacagaaggacaacccaaaacattctgtctttctccctctttccacaggcagactagaga 563
Query: 363 gaatactttctatcacgtaaggaggtaagaggctcagcaggcacagaagggcagctacat 422
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 564 gaatactttctatcaggtaaggaggtaagaggctcagcaggcacagaagggcagctgcat 623
Query: 423 gccaccaataagcccgtacctctgtgcttgactcaggaaccacctctgagtggcggggac 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gccaccaataagcccgtacctctgtgcttgactcaggaaccacctctgagtggcggggac 683
Query: 483 aacccgcctactttgaagccttaaaacatcttaaacttcttttttaatcttgataaaaca 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aacccgcctactttgaagccttaaaacatcttaaacttcttttttaatcttgataaaaca 743
Query: 543 taggtcaacaaccccactttagcagttttggtgtacagttaagtggtgttgcatgtatta 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 taggtcaacaaccccactttagcagttttggtgtacagttaagtggtgttgcatgtatta 803
Query: 603 ttgtgaaaccaatctctgcgatgtttccagcctg 636
||||||||||||||||||||||||| ||||||||
Sbjct: 804 ttgtgaaaccaatctctgcgatgttcccagcctg 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1037
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1027
Effective search space: 642902
Effective search space used: 642902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no057_c24.g1 MSMg01no057_c24.g1 CHROMAT_FILE:
MSMg01no057_c24.g1 PHD_FILE: MSMg01no057_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:03 2005
(518 letters)
>mm_chr5_3820165_3821082
Length = 918
Score = 580 bits (300), Expect = e-170
Identities = 312/316 (98%)
Strand = Plus / Minus
Query: 203 catgagaacttggccaggagaaatagccagtatctggagtacaccactgaggaggtagcc 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 catgagaacttggccaggagaaatagccagtatctggagtacaccactgaggaggtagcc 859
Query: 263 aggctagcagttagaagagtagattaggggttatttcccccccactccccataattatca 322
|||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 858 aggctagcagttagaagagtagattaggggttatttttcccccactccccatagttatca 799
Query: 323 aagccaaataaaataaccatagtctgagtctcatctatttgtaagctagttgggtataag 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 aagccaaataaaataaccatagtctgagtctcatctatttgtaagctagttgggtataag 739
Query: 383 cttaatttggctgtactacagtttagatttctaacgtaggaactatcaaaaacttgctca 442
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 738 cttaatttggctgtactacagtttagatttctaacataggaactatcaaaaacttgctca 679
Query: 443 aacaagaacatgctgacaatattttaaaatgattatttatattgtttgcactttctaaag 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aacaagaacatgctgacaatattttaaaatgattatttatattgtttgcactttctaaag 619
Query: 503 tttcttctaaatgttc 518
||||||||||||||||
Sbjct: 618 tttcttctaaatgttc 603
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
