Query= MSMg01no060_b10.b1 MSMg01no060_b10.b1 CHROMAT_FILE:
MSMg01no060_b10.b1 PHD_FILE: MSMg01no060_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:44 2005
(699 letters)
>mm_chr5_21044371_21045469
Length = 1099
Score = 1216 bits (629), Expect = 0.0
Identities = 666/683 (97%), Gaps = 8/683 (1%)
Strand = Plus / Plus
Query: 17 gaattctttgtttacctctataccccatttttaatagggttacttggttctctggagtct 76
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gaattctttgtttagctctataccccatttttaatagggttacttggttctctggagtct 276
Query: 77 aacttcttgagttctttgtatatattggatattagcccgctatcggatgtagggttggta 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aacttcttgagttctttgtatatattggatattagcccgctatcggatgtagggttggta 336
Query: 137 acgatcttttcccaatctgttggttgccattttgtcctattgacagtatcctttgcctta 196
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aagatcttttcccaatctgttggttgccattttgtcctattgacagtatcctttgcctta 396
Query: 197 cagaaacttaaggactttcaccacaggctaatgaatggttaagtgaacaaacaaacaaaa 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cagaaacttaaggactttcaccacaggctaatgaatggttaagtgaacaaacaaacaaaa 456
Query: 257 aaaaagttagagaacacaaggtagaacactactaatgttacctctgaatatttgtgtgct 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 aaaaagttagagaacacaaggtagaacactactaatgttacctctgaatatttgtgtgct 516
Query: 317 ttacaggatattgaacgaatggtgtgcatgctgctccatacatggcagtttaaaggagtg 376
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 517 ttacaggatattgaacgaatggtgtgcatgctgctccatacattgcagtttaaaggagtg 576
Query: 377 tacatgcatgtggagagaatcccagaaagctatgccaggagatgctggtacaatctgagt 436
|||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 577 tacatgcatgtggaaagaataccagaaagctatgccaagagatgctggtacaatctgagt 636
Query: 437 ggtaacatttcaagtagtctaaaaatatttttctttatatattttcaaatttttatgcat 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 ggtaacatttcaagtagtctaaaaatatttttctttatatattttcaaatttttatgcat 696
Query: 497 ctgttaagaaaagactcacttgagtaaagctgctatgcaagcctagcaaacctgggttca 556
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 697 ctgttaagaaaagactcacttgaataaagctgctatgcaagcctagcaaacctaggttca 756
Query: 557 acctctgggacccatacggtggaaagagaggactgatctcaccaagtcgtcctcggacac 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 acctctgggacccatacggtggaaagagaggactgatctcaccaagtcgtcctcggacac 816
Query: 617 acacacacacacacacacacacacacacacacacacacacacacttttaaatatgattag 676
|||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 817 acacacacacacacacacacacacacacacacacac--------ttttaaatatgattag 868
Query: 677 aagtcaaaatgtttgtaacttta 699
|||||||||||||| ||||||||
Sbjct: 869 aagtcaaaatgtttataacttta 891
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 71
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1099
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1089
Effective search space: 750321
Effective search space used: 750321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no060_b10.g1 MSMg01no060_b10.g1 CHROMAT_FILE:
MSMg01no060_b10.g1 PHD_FILE: MSMg01no060_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:44 2005
(354 letters)
>mm_chr5_21194850_21195603
Length = 754
Score = 685 bits (354), Expect = 0.0
Identities = 354/354 (100%)
Strand = Plus / Minus
Query: 1 aatacctgacacgccgaaacacgatgtgcgtgcgggggtgggttggggtgtgtacctccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 aatacctgacacgccgaaacacgatgtgcgtgcgggggtgggttggggtgtgtacctccg 341
Query: 61 tggtaactacacagcggccatttcccgactccagaaggagaggaagcaagattgtctttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tggtaactacacagcggccatttcccgactccagaaggagaggaagcaagattgtctttc 281
Query: 121 atataagaagcatcttgactggataaaatgtcttacattttttcactcttttactaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 atataagaagcatcttgactggataaaatgtcttacattttttcactcttttactaaata 221
Query: 181 taaatcatagtacagataattgtgggtccgtattcctccccaccgttcgccgtagccgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 taaatcatagtacagataattgtgggtccgtattcctccccaccgttcgccgtagccgct 161
Query: 241 ggggaggtgaaacacggggagcttgacgctgctgctgtcgggtgctgggcttccggggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 ggggaggtgaaacacggggagcttgacgctgctgctgtcgggtgctgggcttccggggag 101
Query: 301 ggaaaacgcagtctgggatgtaggaagccgaagctgatattccctgacttctgg 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 ggaaaacgcagtctgggatgtaggaagccgaagctgatattccctgacttctgg 47
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
