Query= MSMg01no061_a21.b1 MSMg01no061_a21.b1 CHROMAT_FILE:
MSMg01no061_a21.b1 PHD_FILE: MSMg01no061_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:56 2005
(354 letters)
>mm_chr5_79941241_79941993
Length = 753
Score = 638 bits (330), Expect = 0.0
Identities = 346/352 (98%), Gaps = 3/352 (0%)
Strand = Plus / Plus
Query: 1 acactggaaaaaatatccctaagaactagatttgaaggatatttgaggttggaagcctat 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acactggaaaaaa-atccctaagaactagatttgaaggatatttgaggttggaagcctat 259
Query: 61 ttttattaacaatccaggatcaggaaacaggaaaatagattctatcacttcatgaaaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttttattaacaatccaggatcaggaaacaggaaaatagattctatcacttcatgaaaagg 319
Query: 121 gaactggaatcattggttatttctgaaatctaccaagctgcatgtctgcatataagacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 320 gaactggaatcattggttatttctgaaatctaccaagctgcatgtctgcatataaaacag 379
Query: 181 aaatgactctcaacattggattcaatcttggaaaacttttcttcatttaaatatacctaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaatgactctcaacattggattcaatcttggaaaacttttcttcatttaaatatacctaa 439
Query: 241 aggaaatacagagacaaaggagagactaaagaaaagaccatccagagagtcccatctgca 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aggaaata--gagacaaaggagagactaaagaaaagaccatccagagagtcccatctgca 497
Query: 301 gaccccaaacccatacgctatttgtgatgtcaagaagtgcttgctgacagga 352
||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 498 gacaccaaacccatacactatttgtgatgtcaagaagtgcttgctgacagga 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 753
Length adjustment: 9
Effective length of query: 345
Effective length of database: 744
Effective search space: 256680
Effective search space used: 256680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no061_a21.g1 MSMg01no061_a21.g1 CHROMAT_FILE:
MSMg01no061_a21.g1 PHD_FILE: MSMg01no061_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:56 2005
(335 letters)
>mm_chr5_80071775_80072508
Length = 734
Score = 600 bits (310), Expect = e-176
Identities = 329/336 (97%), Gaps = 3/336 (0%)
Strand = Plus / Minus
Query: 1 ttacagttataagaacgtttatagcttagaacagagatttatgaatttagtgactactaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ttacagttataagaacgtttatagcttagaacagagatttatgaatttagtgactactaa 475
Query: 61 gtatctgtgcatgtatattgatatatcagtgtgtgaaatattcatatacagataattttg 120
||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 474 gtatctgtgcatgtatattgatatatcagtgtgagaaatattcatatacagagaattttg 415
Query: 121 tcataaaatcacaaaatggttgacatttatctttagaatccattgcacactcaccttatt 180
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 414 tcataaaatcacaaaattgttgacatttatctttaaaatccattgcacactcaccttatt 355
Query: 181 caaatattcccaaataaaacatatgaataataaaggtatataattaaaggatttccacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 caaatattcccaaataaaacatatgaataataaaggtatataattaaaggatttccacag 295
Query: 241 tattataatgttgaatgtgatattat-atgaatattaatttatcaattcatattgcctaa 299
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 294 tattataatgttgaatgtgata--atcatgaatattaatttatcaattcatattgcctaa 237
Query: 300 ttaattcattgtatgaaaatatctgtagatattgca 335
||||||||||||||||||||||||||||||||||||
Sbjct: 236 ttaattcattgtatgaaaatatctgtagatattgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 734
Length adjustment: 9
Effective length of query: 326
Effective length of database: 725
Effective search space: 236350
Effective search space used: 236350
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
