Query= MSMg01no064_g10.b1 MSMg01no064_g10.b1 CHROMAT_FILE:
MSMg01no064_g10.b1 PHD_FILE: MSMg01no064_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:18 2005
(347 letters)
>mm_chr5_74553526_74554275
Length = 750
Score = 534 bits (276), Expect = e-156
Identities = 310/326 (95%), Gaps = 11/326 (3%)
Strand = Plus / Plus
Query: 1 taatgtatatgagtacactgtagctgtcttcagacacaccagaagagggcatcagatcca 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taatgtatatgagcacactgtagctgtcttcagacacaccagaagagggcatcagatcca 260
Query: 61 ttatagatggctgtgagccaccatgtggttgctgggaattgaactcaggacctctggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttatagatggctgtgagccaccatgtggttgctgggaattgaactcaggacctctggaag 320
Query: 121 agcagtcagtgttcttaaccactgaaccatctctccagcccccagaattgttaaaagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcagtcagtgttcttaaccactgaaccatctctccagcccccagaattgttaaaagaga 380
Query: 181 taactggaaaaa-tgggtaatggtttttacatatgtgtgt--atgcatatgtatgaattt 237
|||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 taactggaaaaaatgcctaatggtttttacatatgtgtgtgtatgcatatgtatgaattt 440
Query: 238 gatatgtaaggcacagtaagatattgatattttta----ttaaacagcatcattatagaa 293
||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 441 tatatgtaaggcacagtaagatattgatat----aacaattaaacagcatcattatagaa 496
Query: 294 aactatagtagaagttatatgaatat 319
||||||||||||| ||||||||||||
Sbjct: 497 aactatagtagaaattatatgaatat 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 750
Length adjustment: 9
Effective length of query: 338
Effective length of database: 741
Effective search space: 250458
Effective search space used: 250458
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no064_g10.g1 MSMg01no064_g10.g1 CHROMAT_FILE:
MSMg01no064_g10.g1 PHD_FILE: MSMg01no064_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:18 2005
(329 letters)
>mm_chr5_74729737_74730465
Length = 729
Score = 605 bits (313), Expect = e-177
Identities = 325/329 (98%)
Strand = Plus / Minus
Query: 1 ctaatgggaaggctcacagacttcagacagaggcttgactgctatgcaaaagtctccttc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ctaatgggaaggctcacagacttcagacagaggcttgactgctatgcaaaagtctccttg 470
Query: 61 cccatctatttttcatcaaaaccagactactgcagtgagagtgattgaaaatgagccctg 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 caaatctatttttcatcaaaaccagactactgcagtgagagtgattgaaaatgagccctg 410
Query: 121 ctgtgaacatttgagcatcagtaaagtaaaatacaggagcccaattatcaatcagaaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ctgtgaacatttgagcatcagtaaagtaaaatacaggagcccaattatcaatcagaaaag 350
Query: 181 gatctgagaaatcacagttgcctttacagttgaggctgagccatgataaggcaaaaagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gatctgagaaatcacagttgcctttacagttgaggctgagccatgataaggcaaaaagtc 290
Query: 241 atgcccagagacggctgcagtcccgtgcagtcctcttcagattcgtgcaaggatttgcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 atgcccagagacggctgcagtcccgtgcagtcctcttcagattcgtgcaaggatttgcct 230
Query: 301 gtggcccaaagctagattccagtgggtgc 329
|||||||| ||||||||||||||||||||
Sbjct: 229 gtggcccagagctagattccagtgggtgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
