TGCGGCCGCTATACGACTCCTATATCCAGAGATGCGCGGAATTCTGTAAA
TTTCTCCCTATGTATCTAACTGGCACCTCAAAAACAAAACAATTTTTCCC
ATGGCTAGAGAGAAAGAACACTGCTTCAACGCACTTCTTGTCCTTGCAGA
GGACCCAGGTTTAATTCCATGCACTCACTCACAACTTATTATAATTCTAG
TTCTTATCTGGCATGAGATAAGCACATGTTGTAGATACACACATGCAAGC
TAAACAGTAGTTCACATAAAATAAAATAATCACTTAAAAATATTTCCAAA
ACTGACTTCATTGATATTCTCAATGGGTTTGTGCCATAGCCTGCCTCACC
TTAGTGAATGGCAAGTATATTTTCCTATGTGATTCACATATAGCTCTTCA
AAATGATCAGTAGTATATTAAATAGTATGGTCCCATATCATCTTTAGAGG
TATCCCTTTTAAATTTGAGATTGTATTCATATTCATATTGACTAAAGAAA
GGTCTTTTCAATGGAGTCTCAATGGGTATATCAGCCACACTTAAAGTATG
TTTCAAGCTGTAGACAGCCAATATAAAAAAAAAATCAATAGCATTTTTGA
AATTTTTGTCAGATATTGCTTTGTTTGGTGACCTTTTATCTCACTGATCT
TTTGCTTCTATATGATGGTTTCTAATTGTCTGTTTATTT

CGATGAAGTGGGAGGCCTGGCGGCCGCCTGGTTTCATACTTGGGGTGACC
TATAGAAGTTCCCCGAAATTCTACATGAAATACTTATTTTTAAAAAGATA
AAATCTATGAGCTGCAGTGACTAGGTGAAATTGTTAGTGAAGCCATACTC
TGTGGTTATGAGGGGACTACCTGCAGGAAGCTCTCTAGGTCTTCGCTAAT
GCGAGTGCACTGAGAATATCATGTTCAAGCAGGTGAACAGTTAAAAGATT
AATGTTTGTACTAGAATCTGTGTGTGATGTGGACATTGAAGAGTTGTAGT
TGTTTGAATAAGATGCCTCTTTGATATTCATATAATTCAATTTTTGCTCA
TCAGGGAGTGGCAAGTGACCTAAAGGACTACAAAGAATATGACATATGGC
CTTATTGGAGTAGATGTTGCCTTATTCCAGACCTGTGTCAGTGGAAATGA
ATTTTGCAGTTACAAAAGCCCATGCCAGGTCTGTACTCCCCTCTTCCCTT
TCCTTTTTCCTCTCCTCCCTCCCCCTCTCGTCTCCCTTCCCAGTTCCCTT
TCCCTCACCTACCCCCTCTCACTCCAGAGAAAGACACAGCACTCAAAATC
TGCTACAGGGCCTATCTGACAGCATGCTCTCAGCCATGATAATGAATGAC
ATTTCTGATACTTACAGCAAGCTTCTAATTAAATGATTT

Query= MSMg01no070_b21.b1 MSMg01no070_b21.b1 CHROMAT_FILE:
MSMg01no070_b21.b1 PHD_FILE: MSMg01no070_b21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:04 2005
         (641 letters)



>mm_chr5_56059792_56060833
          Length = 1042

 Score = 1156 bits (598), Expect = 0.0
 Identities = 629/640 (98%), Gaps = 4/640 (0%)
 Strand = Plus / Minus

                                                                        
Query: 4    gaattctgtaaatttctccctatgtatctaactggcacctcaaaaacaaaacaatttttc 63
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1004 gaattctgtaaatttctacctatgtatctaactggcacctcaaaaacaaaacaatttttc 945

                                                                        
Query: 64   ccatggctagagagaaagaacactgcttcaacgcacttcttgtccttgcagaggacccag 123
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944  ccatggctagagagaaagaacactgcttcaacgcacttcttgtccttgcagaggacccag 885

                                                                        
Query: 124  gtttaattccatgcactcactcacaacttattataattctagttcttatctggcatgaga 183
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 884  gtttaattccatgcactcactcacaacttattataattctagttcctatctggcatgaga 825

                                                                        
Query: 184  taagcacatgttgtagatacacacatgcaagctaaacagtagttcacataaaataaaata 243
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824  taagcacatgttgtagatacacacatgcaagctaaacagtagttcacataaaataaaata 765

                                                                        
Query: 244  atcacttaaaaatatttccaaaactgacttcattgatattctcaatgggtttgtgccata 303
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764  atcacttaaaaataattccaaaactgacttcattgatattctcaatgggtttgtgccata 705

                                                                        
Query: 304  gcctgcctcaccttagtgaatggcaagtatattttcctatgtgattcacatatagctctt 363
            |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 704  gcctgcctcaccttagtgtatggcaagtatattttcctatgtgattcatatatagctctt 645

                                                                        
Query: 364  caaaatgat-cagtagtatattaaatagtatggtcccatatcatctttagaggtatccct 422
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644  caaaatgattcagtagtatattaaatagtatggtcccatatcatctttagaggtatccct 585

                                                                        
Query: 423  tttaaatttgagattgtattcatattcatattgactaaagaaaggtcttttcaatggagt 482
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584  tttaaagttgagattgtattcatattcatattgactaaagaaaggtcttttcaatggagt 525

                                                                        
Query: 483  ctcaatgggtatatcagccacacttaaagtatgtttcaagctgtagacagccaatataaa 542
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524  ctcaatgggtatatcagccacacttaaagtatgtttcaagctgtagacagccaatataaa 465

                                                                        
Query: 543  aaaaaaatcaatagcatttttgaaattttt-gtcagatattgctttgtttggtgaccttt 601
            |||||  |||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 464  aaaaa--tcaatagcatttatgaaattttttgtcagatattgctttgtttggtgaccttt 407

                                                    
Query: 602  tatctcactgatcttttgcttctatatgatggtttctaat 641
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 406  tatctcactgatcttttgcttctatatgatggtttctaat 367


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1042
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1032
Effective search space:   651192
Effective search space used:   651192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)