Query= MSMg01no072_c09.b1 MSMg01no072_c09.b1 CHROMAT_FILE:
MSMg01no072_c09.b1 PHD_FILE: MSMg01no072_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:47 2005
(349 letters)
>mm_chr5_46121609_46122355
Length = 747
Score = 621 bits (321), Expect = 0.0
Identities = 342/353 (96%), Gaps = 10/353 (2%)
Strand = Plus / Plus
Query: 1 ataaataattcatgaattatagtgcaattgatttatgcataaatataactaattgcctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataaataattcatgaattatagtgcaattgatttatgcataaatataactaattgcctaa 260
Query: 61 caatcagtttatattaacaaaatctgtcaaaatcaaggcagccacagagttttactaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caatcagtttatattaacaaaatctgtcaaaatcaaggcagccacagagttttactaaat 320
Query: 121 tactgcgacaatggaaatactgcaattaaaaaaaaaaacccacaagtatctgcactgtaa 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 tactgcgacaatggaaatactgcaattaaaaaaaaaa-cccacaagtatctgcactgtaa 379
Query: 181 acaactaaaaaagaaatcagtttcactaaagtcagtatacactttaatataaaattgtca 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 380 acaactaaaaaagaaatcagtttcactaaagtcagtatacagtttaatataaaattgtca 439
Query: 241 tcagctatcttta----tttggtttaaacaactttactgagcagtagttttctaaaaaca 296
||||||||| | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcagctatc---agaaat--ggtttaaacaactttactgagcagtagttttctaaaaaca 494
Query: 297 gaggcactgtttttttcttttccttctttttttattttaaatataaaatactt 349
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gaggcactgtttttttcttttccttctttttttattttaaatataaaatactt 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 747
Length adjustment: 9
Effective length of query: 340
Effective length of database: 738
Effective search space: 250920
Effective search space used: 250920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_c09.g1 MSMg01no072_c09.g1 CHROMAT_FILE:
MSMg01no072_c09.g1 PHD_FILE: MSMg01no072_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:47 2005
(626 letters)
>mm_chr5_46261640_46262665
Length = 1026
Score = 731 bits (378), Expect = 0.0
Identities = 384/386 (99%), Gaps = 1/386 (0%)
Strand = Plus / Minus
Query: 1 tctataaactcacctaccagtgccatcctcacactactaggcctagctctagttacacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tctataaactcacctaccagtgccatcctcacactactaggcctagctctagttacacac 327
Query: 61 atcctgaaaaagctttttatgataagcccttgaaaaccaaacttgcgtgcactatctcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atcctgaaaaagctttttatgataagcccttgaaaaccaaacttgcgtgcactatctcca 267
Query: 121 cactcccaggctagaataaagattcacagctcctgtacctgcctagcctgagacaggctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cactcccaggctagaataaagattcacagctcctgtacctgcctagcctgagacaggctg 207
Query: 181 gaatctcacatcacacacataaccattggaaaaaagttctcacgtctaggtcacattg-a 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 206 gaatctcacatcacacacataaccattggaaaaaagttctcacgtctaggtcacattgaa 147
Query: 240 aaaaacaccagcaacattaaaggacaaaatagtacattcttccccagatccattagtctt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 aaaaacaccagcaacattaaaggacaaaatagtacattcttccccagatccattagtctt 87
Query: 300 atagaaatattccccaatggtaattacttagatgaattccaggatacagaatttaaaaga 359
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 atagaaatattcctcaatggtaattacttagatgaattccaggatacagaatttaaaaga 27
Query: 360 accaattataaattcgatcaaaactt 385
||||||||||||||||||||||||||
Sbjct: 26 accaattataaattcgatcaaaactt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
