AATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCCTGATCTTTCCACACTTTTATCATGAATGGGTGTTGGATCTTG
TCAAATGCTTTTTCTGCATCTAACGAGATGATCATGTGGTTTTTGTCTTT
GAGTTTGTTTATGTAATGGACCTGGAGGGCATCATCCTGAGTGAGGTAAC
ACATTCACAAAGAAACTCACACAATATGTACTCACTGATAAGTGGATATT
AGCCCCAAACCTAGGATACCCAAGATATAAGATATAATTTGCTAAACACA
TGAAACTCAAGAAGAATGAAGACTGAAGTGTGGACACTATGCCCCTCCTT
AGATTTGGGAACATAATTTCCATGGAACGAGTTACAGAGACAAAGTTTGG
AGCTGAGATGAAAGGATGGACCATGTAAAGACTGCCATATCCAGGGATCC
ACCCCATAATCAGCATCCAAACGCTGACACCATTGCATACACTAGCAAGA
TTTTATTGAAAGGACCCAGATGTAGCTGTCTCTTGTGAGACTATGCCGGG
GCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTAATGGATGGATCA
TAGGGCTCCCAATGGAGGAGATAGAGAAAGTAGCCAAGTAGCTAAAGGGA
TCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCTGGA
GCTCTTGA

NCCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAGTAACAATTACATCTTGGGCAG
ACTTAAAGTGAATTAAATGTGAATTGATTAAAAAATATGGATCCAAATAC
ACACGCGCGCACCCACACACACACACACACACACACACACACACACACAC
ACACACACACACAGAGTCTTTTCTAAAAAGTGAACTTGATAATTCTTCTA
GAAAGAGAACCTGCTTAGCCAAAATTTAAGTATATTAGGCATTAATATAC
TGTGTTCATTTTAATTCATATATATATTGTTCCTGTGTGTTTTCAATGAC
TATATCAAAATGCACACAGAGATTGTCTTCATAAAGTTCTGAAAACACTG
GAAGAAGAATTCTTATTCCCTGTGAGTTCTGAGAGTCGTGAGGGCAAGCA
GACTGGAAGCCAAATTCTGAAGAGGAACTTGAAGAGAACTGAAAACATGG
ACAAAAACAAGAAGGAAGCCATACGCTGAAGTCCCACCAAATAAAATAAA
CAAAAAGCCACAACTTGACTAAAAACAACTTTGAAGGATAGCTTCAATCA
TTTCAGAGCAGTGTACTATAAAGCATAAGAACAGCTAACCTATCAATCTT
CTTGTGTGCAAATGATAGTGTGCTTAAGGTATAGTATCATTACATTGCTC
ACAGGAACACTA

Query= MSMg01no073_o03.g1 MSMg01no073_o03.g1 CHROMAT_FILE:
MSMg01no073_o03.g1 PHD_FILE: MSMg01no073_o03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:05 2005
         (635 letters)



>mm_chr5_43153946_43154982
          Length = 1037

 Score = 1093 bits (565), Expect = 0.0
 Identities = 612/637 (96%), Gaps = 16/637 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtaacaattacatcttgggcagacttaaagtgaattaaatgtgaattgattaaaaaata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 agtaacaattacatcttgggcagacttaaagtgaattaaatgtgaattgattaaaaaata 274

                                                                       
Query: 61  tggatccaaatacacacgcgcgcacccacacacacacacacacacacacacacacacaca 120
           || ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||
Sbjct: 275 tgtatccaaatacacacgtgcgtgcccacacacacacacacacacacacacacacacaca 334

                                                                       
Query: 121 cacacacacacacacagagtcttttctaaaaagtgaacttgataattcttctagaaagag 180
           ||||              ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 caca--------------gtcttttctaaaaagtgaacttgataattcttctagaaagag 380

                                                                       
Query: 181 aacctgcttagccaaaatttaagtatattaggcattaatatactgtgttcattttaattc 240
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 aacctgcttagccaaaatttaagtctattaggcattaatatactgtgttcattttaattc 440

                                                                       
Query: 241 atatatatattgttcctgtgtgttttcaatgactatatcaaaatgcacacagagattgtc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atatatatattgttcctgtgtgttttcaatgactatatcaaaatgcacacagagattgtc 500

                                                                       
Query: 301 ttcataaagttctgaaaacactg--gaagaagaattcttattccctgtgagttctgagag 358
           |||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcataaagttctgaaaacagtgtggaagaagaattcttattccctgtgagttctgagag 560

                                                                       
Query: 359 tcgtgagggcaagcagactggaagccaaattctgaagaggaacttgaagagaactgaaaa 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcgtgagggcaagcagactggaagccaaattctgaagaggaacttgaagagaactgaaaa 620

                                                                       
Query: 419 catggacaaaaacaagaaggaagccatacgctgaagtcccaccaaataaaataaacaaaa 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catggacaaaaacaagaaggaagccatacgctgaagtcccaccaaataaaataaacaaaa 680

                                                                       
Query: 479 agccacaacttgactaaaaacaactttgaaggatagcttcaatcatttcagagcagtgta 538
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agccacatcttgactaaaaacaactttgaaggatagcttcaatcatttcagagcagtgta 740

                                                                       
Query: 539 ctataaagcataagaacagctaacctatcaatcttcttgtgtgcaaatgatagtgtgctt 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctataaagcataagaacagctaacctatcaatcttcttgtgtgcaaatgatagtgtgctt 800

                                                
Query: 599 aaggtatagtatcattacattgctcacaggaacacta 635
           || |||||||||||||||||| |||||||||||||||
Sbjct: 801 aatgtatagtatcattacattactcacaggaacacta 837


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1037
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1027
Effective search space:   641875
Effective search space used:   641875
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)