Query= MSMg01no074_a05.b1 MSMg01no074_a05.b1 CHROMAT_FILE:
MSMg01no074_a05.b1 PHD_FILE: MSMg01no074_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:15 2005
(205 letters)
>mm_chr5_7188625_7189229
Length = 605
Score = 373 bits (193), Expect = e-108
Identities = 202/205 (98%)
Strand = Plus / Plus
Query: 1 ataataaagagacccacaactggtaactgaaaagagaagggactacagagcttgcagctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataataaagagacccacaactggtaactgaaaagagaagggactacagagcttgcagctt 260
Query: 61 ccattagattttcctgctctcccttcaactgaaacagagccatggtaatacccaactgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccattagattttcctgctctcccttcaactgaaacagagccatggtaatacccaactgct 320
Query: 121 ccaaattctacaacacatatgctgtacaatgtgatataaccaaaacactaaacccttcct 180
||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 321 ccaaattctacaacacatatgttgtacaatgtgatataaccaaagcactaaacccttcct 380
Query: 181 tttttacttcttattttattttgtt 205
||||||||| |||||||||||||||
Sbjct: 381 tttttactttttattttattttgtt 405
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 205
Length of database: 605
Length adjustment: 8
Effective length of query: 197
Effective length of database: 597
Effective search space: 117609
Effective search space used: 117609
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no074_a05.g1 MSMg01no074_a05.g1 CHROMAT_FILE:
MSMg01no074_a05.g1 PHD_FILE: MSMg01no074_a05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:15 2005
(236 letters)
>mm_chr5_7447980_7448615
Length = 636
Score = 416 bits (215), Expect = e-121
Identities = 230/237 (97%), Gaps = 5/237 (2%)
Strand = Plus / Minus
Query: 1 tttccccttaaag-aaaataataaataatttcacaaaacattgaaaatccccagacaagc 59
||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 533 tttccccttaaagaaaaataataaataatttcacaaaacattgaaaatcagcagacaagc 474
Query: 60 tattgaatttaaacaaacaaacaaacaaacaaacaaacaaaaaccaaagctaagatgcca 119
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tattgaattt----aaacaaacaaacaaacaaacaaacaaaaaccaaagctaagatgcca 418
Query: 120 tgacattcttttttctttttggttctttaatctagaaacactattaaaagattttcctca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tgacattcttttttctttttggttctttaatctagaaacactattaaaagattttcctca 358
Query: 180 tttttatttatgtgtacatgtgtgtatctgtacataggtatgtgcatgtgaatgtct 236
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tttttatttatgtgtacatgtgtgtatctgtacataggtatgtgcatgtgaatgtct 301
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
