Query= MSMg01no074_f17.b1 MSMg01no074_f17.b1 CHROMAT_FILE:
MSMg01no074_f17.b1 PHD_FILE: MSMg01no074_f17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:42 2005
(641 letters)
>mm_chr5_7188347_7189389
Length = 1043
Score = 1123 bits (581), Expect = 0.0
Identities = 622/637 (97%), Gaps = 5/637 (0%)
Strand = Plus / Plus
Query: 7 gaattcaattcctttca-atataattattttcttaca-tacaaattaattgccagtctga 64
|||||||| |||||| | ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 207 gaattcaactccttttacatataattattttcttacaatacaaattaattgccagtctga 266
Query: 65 aagtagagtaaccaaaatttttcagtggtgagaacgccaaacaccaagccacagggaaaa 124
||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 267 aagtagagtaatgaaaatttttcagtggtgagaacaccaaacactaagccacagggaaaa 326
Query: 125 ctaattttatagttacctaaatttacatattatatgcctatcctagagtatgagccatct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctaattttatagttacctaaatttacatattatatgcctatcctagagtatgagccatct 386
Query: 185 accaggtgtcacactgagaattctctgggttaaacttgcaagttagcatatatctcaata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 accaggtgtcacactgagaattctctgggttaaacttgcaagttagcatatatctcaata 446
Query: 245 ctcaagggaggagcagcttaagtagatggctgataataaagagacccacaactggtaact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ctcaagggaggagcagcttaagtagatggctgataataaagagacccacaactggtaact 506
Query: 305 gaaaagagaagggactacagagcttgcagcttccattagattttcctgctctcccttcaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gaaaagagaagggactacagagcttgcagcttccattagattttcctgctctcccttcaa 566
Query: 365 ctgaaacagagccatggtaatacccaactgctccaaattctacaacacatatgctgtaca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 567 ctgaaacagagccatggtaatacccaactgctccaaattctacaacacatatgttgtaca 626
Query: 425 atgtgatataaccaaaacactaaacccttccttttttacttcttattttattttgttttc 484
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 627 atgtgatataaccaaagcactaaacccttccttttttactttttattttattttgttttc 686
Query: 485 acttttattggttattttatttatttaccttgaaaatgttatccttcttcccagtttccc 544
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 687 acttttattggttattttatttatttacctttaaaatgttatccttcttcccagtt---c 743
Query: 545 ccccccacaagcctcccccactctgcctctattagggtgctccctcacccacgcacccac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ccccccacaagcctcccccactctgcctctattagggtgctccctcacccacgcacccac 803
Query: 605 ttgtgcctcagcaccctagcatttccctattctgggt 641
|||||||||||||||||||||||||||||||||||||
Sbjct: 804 ttgtgcctcagcaccctagcatttccctattctgggt 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1043
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1033
Effective search space: 651823
Effective search space used: 651823
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no074_f17.g1 MSMg01no074_f17.g1 CHROMAT_FILE:
MSMg01no074_f17.g1 PHD_FILE: MSMg01no074_f17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:42 2005
(590 letters)
>mm_chr5_7304547_7305536
Length = 990
Score = 1102 bits (570), Expect = 0.0
Identities = 585/590 (99%)
Strand = Plus / Minus
Query: 1 tgtggtgacttcctctatagacggagactgtgattcgtcatctaggtacaaaacggggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 tgtggtgacttcctctatagacggagactgtgattcgtcatctaggtacaaaacggggac 731
Query: 61 tttgattgcagagatatgccactgcatgaacagcctcgtggggatgttgtgagaagcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 tttgattgcagagatatgccactgcatgaacagcctcgtggggatgttgtgagaagcaac 671
Query: 121 aacgattttcatgttttggagcataaattctgtttcactcttttcatgggcaacataatc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gacgattttcatgttttggagcataaattctgtttcactcttttcatgggcaacataatc 611
Query: 181 tagaagaatccggaagagtgtgccattggaactctcaagaatgtgcagaaaagtacttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tagaagaatccggaagagtgtgccattggaactctcaagaatgtgcagaaaagtacttgg 551
Query: 241 gtataggagcatgagacctgtcactgattcgcctaaatgatgtttcagaattgactgaaa 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gtatatgagcatgagacctgtcactgattcgcctaaatgatgtttcagaattgactgaaa 491
Query: 301 cagttgctcatagtactcagagatgtcctttttctccgtgccgccttgtatgtagcccac 360
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 490 cagttgctcatagtactcagagatgtcctttttctccgtgttgccttgtatgtagcccac 431
Query: 361 tagaaacatcctgtgaaggaggaatttctttagctgtagtctgtgcttctcttcctgaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tagaaacatcctgtgaaggaggaatttctttagctgtagtctgtgcttctcttcctgaag 371
Query: 421 gtgcaggtaattggtacgaggaaccttgggcagaagaagaggatccacttgaaattgctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gtgcaggtaattggtacgaggaaccttgggcagaagaagaggatccacttgaaattgctt 311
Query: 481 tttgctgcccttccgattatggaccatgaaagacatgatgaatcttatttcttttttaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tttgctgcccttccgattatggaccatgaaagacatgatgaatcttatttcttttttaga 251
Query: 541 tgattacaagtctcaatggcagtgaattcttatttttatttcttatgatc 590
||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 250 tgattacaagtctcaatggtagtgaattcttatttttatttcttatgatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
