Query= MSMg01no075_m03.b1 MSMg01no075_m03.b1 CHROMAT_FILE:
MSMg01no075_m03.b1 PHD_FILE: MSMg01no075_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:30 2005
(400 letters)
>mm_chr5_75986556_75987355
Length = 800
Score = 719 bits (372), Expect = 0.0
Identities = 390/396 (98%), Gaps = 2/396 (0%)
Strand = Plus / Minus
Query: 5 ggaattctcccttgtggccactgatctgagtgcctgtaaggaacaagagaaaaatgcctg 64
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ggaattctcccttgtggaaactgatctgagtgcctgtaaggaacaagagaaaaatgcctg 359
Query: 65 aaactgaactgttttctagaactgagaaatacaacaataaacaacaacaacccatccagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 aaactgaactgttttctagaactgagaaatacaacaataaacaacaacaacccatccagt 299
Query: 125 atgtccactgagaaaactctagttctttctcatagctttagaatatgaccatccctgacg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 atgtccactgagaaaactctagttctttctcatagctttagaatatgaccatccctgacg 239
Query: 185 acagggaaaggaagcccattctagaattgtaagcttgtttgtttgtttgtttgtttggga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 acagggaaaggaagcccattctagaattgtaagcttgtttgtttgtttgtttgtttggga 179
Query: 245 cagagcctatgtggtcctggcattccctatgtagaccaggttggcctctagctcagggat 304
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 178 cagagcctatgtggtcctggcatt-cctatgtagaccaggttggcctctagctcagggat 120
Query: 305 ccccctgtctctacctcccaggtgctggggttaaaggcatgtaaggtgctcaccctcctc 364
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 119 ccccctgtctctacctcccaggtgctggggttaaaggcatgtaaggtgctca-cctccac 61
Query: 365 gcatggctaggaacctgttagcatatttgaaatcaa 400
|| |||||||||||||||||||||||||||||||||
Sbjct: 60 gcctggctaggaacctgttagcatatttgaaatcaa 25
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_m03.g1 MSMg01no075_m03.g1 CHROMAT_FILE:
MSMg01no075_m03.g1 PHD_FILE: MSMg01no075_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:30 2005
(356 letters)
>mm_chr5_75868009_75868764
Length = 756
Score = 627 bits (324), Expect = 0.0
Identities = 348/356 (97%)
Strand = Plus / Plus
Query: 1 actctacaacccagacagatcttgaatgtgtggttttcctgcctcagtctcctgaatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctacaacccagacagatcttgaatgtgtggttttcctgcctcagtctcctgaatggt 260
Query: 61 tgagattacaggcctggtctatgaagccttgacagaaatccctttccctgactcatgcta 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagattacagtcctggtctatgaagccttgacagaaatccctttccctgactcatgcta 320
Query: 121 agtcttactagatcataactgactggcacattattagggtgtgatctttgggatcagcta 180
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 321 agtcttactagatcataactgactggcacgttattggggtgtgatctttgggatcagcta 380
Query: 181 taataccgcagaggttgcagcagagagcccagtcttgctgttttcaagcaagaatttgat 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taataccccagaggttgcagcagagagcccagtcttgctgttttcaagcaagaatttgat 440
Query: 241 gctccgtggtaggcactccaatgggaaggattctgcttaggttcaggtcattgagtctgc 300
||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 441 gctccgtgggaggcactccaatgggaaggattctgcttgggttcaggccattgagtctgc 500
Query: 301 catggaagtcctggagctaatttccccttattattgaacttgacacagctagggta 356
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 catggaagtcctggagctaatttccccttattattgaacttgaaacagctagggta 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 756
Length adjustment: 9
Effective length of query: 347
Effective length of database: 747
Effective search space: 259209
Effective search space used: 259209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
