XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CACAAATATTCCGGGACAGCATACCCAAATTTATGGGACACAATAAAAGC
AGTATTAAGAGGGAAGTTCATATTACTTCCATAAAGTGCTTCCATAAAGA
AATTAGAAAAATTTCATATTAGTAATTTAAAAGTACACGTGAAAGCTCTA
GAAAAAAAAAAAAAGAAGCAAGCACACCAAACAGGTGTAGAAGGTAGGAA
ATAATAAAACTCAGGGATGAAATCAATCAGAAACAAAGAAAACAATACAA
AGAATCAAGACCTAGTTCTTTGAGAAAATCAACAAGATAGACAAACCTTT
AGCAAAACTAATGAAAGAGACAGAGACAATATCAAAATAAATAAACTCAG
TAGAAAAGAGGGAGACATAACAAGTGACATTGAGGAAATTCAAAGAATCC
TAAGTTCTTACCTTAATGAAATGGAAGAATTTCTAGACAGATACCACTTA
CCAATATTAAATCAACATCAAGTAAATTTAAACAACCCCATAACCTCTAA
CTGAATTGAAACAGCCATTAAAACTTTCACAACCAAAAAAAAAAAAAAAA
AAAAAAGCCCAAGGCAAGACATGATGTCATGCATAGGTTTTGACACAGCT
AGAGTTATGCAAGAAGAGGCATAAGCCA

CCCGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTGGCTTCTTTGTGGAAGAGAATAA
TTTATTGACTACCTGGACCATGTTCTCTATGATAATCAATAAGTGCTCTC
CAGTATATGTATGGATTTTAAAGAACTTTGACTAATGCACTAATACACTG
CCCTATATTTAGGTTTTATTTGTAGCGATGTCCTTCCAGGATATGTTAGA
ACTGTTTCTGATGCTGTTGAACTTTCTTCACTGATACCTATAAATATATT
TATATCAATAAATATTTAGAAAGCATCTTCTGTCTACACAGTATCACAGA
AAGTATCTCAGATACATACATACATACATATATATATATGTATACATATA
TATATATATACATGTATACATATATATATGAGAGAGAGAGAGAGAGAGCA
TATAGAACACTCTATGTCATATAAATCCCTGCCTTAAGTAGCATCAAATT
TCAGATATAATTTCATATACCATACATCATTCTATTTTTTTTCAGTACAG
GGGAACAACAGGGCCAAGAATTGGGAGTGGGTGGGTGGGGGAAGTGNNNN
CTNTNTTTTTTTTNTTTTTTTTTTTCTTCTTGTTTNNTTTTTTTNTTCTT
TTTGTTTTTTNTTGTTGTTGTTGTTTTTTTTTA

Query= MSMg01no075_p01.g1 MSMg01no075_p01.g1 CHROMAT_FILE:
MSMg01no075_p01.g1 PHD_FILE: MSMg01no075_p01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:44 2005
         (514 letters)



>mm_chr5_79667405_79668318
          Length = 914

 Score =  553 bits (286), Expect = e-161
 Identities = 388/428 (90%), Gaps = 16/428 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctggcttctttgtggaagagaataatttattgactacctggaccatgttctctatgataa 60
           |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 413 ctggcttctttgtggaagagaataatttattgactacctggaccacattctctatgataa 354

                                                                       
Query: 61  tcaataagtgctctccagtatatgtatggattttaaagaactttgactaatgcactaata 120
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 353 tcaataagtgctctccagtatatgtatggactttaaagaactttgactaatgcactaata 294

                                                                       
Query: 121 cactgccctatatttaggttttatt-tgtagcgatgtccttccaggatatgttagaactg 179
           ||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||  
Sbjct: 293 cactgccctatatttaggttttattct-tagctatgtccttccaggatatgttagaacaa 235

                                                                       
Query: 180 tttctgatgctgttgaactttcttcactgatacctataaatatatttatatcaataaata 239
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 234 tttctgatgctgttgaactttcttcgctgatacctataaatatatttatatcaataaata 175

                                                                       
Query: 240 tttagaaagcatcttctgtctacacagtatcacagaaagtatctcagatacatacataca 299
           |||||||||||||||||||||||||||||||||||||||||||||||||          |
Sbjct: 174 tttagaaagcatcttctgtctacacagtatcacagaaagtatctcagat----------a 125

                                                                       
Query: 300 tacatatatatatatgtatacatatatatatatatacatgtatacatatatatatgagag 359
           || |||| ||||||| |||||||| ||| | | | | | | | | | | | | | |||||
Sbjct: 124 tatatat-tatatatatatacatacatacagagagaga-g-agagagagagaga-gagag 69

                                                                       
Query: 360 agagagagagagagcatatagaacactctatgtcatataaatccctgccttaagtagcat 419
           ||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 68  agagagagagagagcatatagaacattcaatgtcataaaaatccctgccttaagtagcat 9

                   
Query: 420 caaatttc 427
           ||||||||
Sbjct: 8   caaatttc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space:   455616
Effective search space used:   455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)