Query= MSMg01no076_p14.b1 MSMg01no076_p14.b1 CHROMAT_FILE:
MSMg01no076_p14.b1 PHD_FILE: MSMg01no076_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:09 2005
(196 letters)
>mm_chr5_58454800_58455395
Length = 596
Score = 375 bits (194), Expect = e-109
Identities = 194/194 (100%)
Strand = Plus / Minus
Query: 1 cagtttgaaagggattcattgtcaaatgtccatttaaataactggctatactgtttaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cagtttgaaagggattcattgtcaaatgtccatttaaataactggctatactgtttaatt 335
Query: 61 aaataactctccaaaattgcactgcgaaatgagtatattagtcattcaaatcctcaacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aaataactctccaaaattgcactgcgaaatgagtatattagtcattcaaatcctcaacat 275
Query: 121 ttgagaacattcggggttgaaactgatggtggatttaaaagactcattaccacacatgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ttgagaacattcggggttgaaactgatggtggatttaaaagactcattaccacacatgga 215
Query: 181 tatttcacatcttt 194
||||||||||||||
Sbjct: 214 tatttcacatcttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 596
Length adjustment: 8
Effective length of query: 188
Effective length of database: 588
Effective search space: 110544
Effective search space used: 110544
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no076_p14.g1 MSMg01no076_p14.g1 CHROMAT_FILE:
MSMg01no076_p14.g1 PHD_FILE: MSMg01no076_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:09 2005
(323 letters)
>mm_chr5_58316976_58317698
Length = 723
Score = 619 bits (320), Expect = 0.0
Identities = 323/324 (99%), Gaps = 1/324 (0%)
Strand = Plus / Plus
Query: 1 attcttcttaggtcttggattactagaaagcttagtgagtggcacatacctgtattccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 attcttcttaggtcttggattactagaaagcttagtgagtggcacatacctgtattccca 259
Query: 61 ggcttgggacatgttcaaagacaggtt-aattttgtgtgacacaacttttgtgaactata 119
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 260 ggcttgggacatgttcaaagacaggtttaattttgtgtgacacaacttttgtgaactata 319
Query: 120 aagcaagtttaggcaagtcaggtctatatattgataactggtctcaacaaaccaaccaac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aagcaagtttaggcaagtcaggtctatatattgataactggtctcaacaaaccaaccaac 379
Query: 180 aaaccaatctcctcaaaaataaaatgtataacaaaagaatgtatagcatattctttcagc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaaccaatctcctcaaaaataaaatgtataacaaaagaatgtatagcatattctttcagc 439
Query: 240 cttttgcacaaagcaatctcttattttatcatcatgaaccaatcaggccattgcgttgac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cttttgcacaaagcaatctcttattttatcatcatgaaccaatcaggccattgcgttgac 499
Query: 300 atgagtcaagtattcatgtcacta 323
||||||||||||||||||||||||
Sbjct: 500 atgagtcaagtattcatgtcacta 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
