Query= MSMg01no080_d03.b1 MSMg01no080_d03.b1 CHROMAT_FILE:
MSMg01no080_d03.b1 PHD_FILE: MSMg01no080_d03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:01 2005
(490 letters)
>mm_chr5_75986557_75987446
Length = 890
Score = 779 bits (403), Expect = 0.0
Identities = 412/415 (99%), Gaps = 1/415 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcccttgtggaaactgatctgagtgcctgtaaggaacaagagaaaaatgcctg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ggaattctcccttgtggaaactgatctgagtgcctgtaaggaacaagagaaaaatgcctg 358
Query: 64 aaactgaactgttttctagaactgagaaatacaacaataaacaacaacaacccatccagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 aaactgaactgttttctagaactgagaaatacaacaataaacaacaacaacccatccagt 298
Query: 124 atgtccactgagaaaactctagttctttctcatagctttagaatatgaccatccctgacg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 atgtccactgagaaaactctagttctttctcatagctttagaatatgaccatccctgacg 238
Query: 184 acagggaaaggaagcccattctagaattgtaagcttgtttgtttgtttgtttgtttggga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 acagggaaaggaagcccattctagaattgtaagcttgtttgtttgtttgtttgtttggga 178
Query: 244 cagagcctatgtggtcctggcattccctatgtagaccaggttggcctctagctcagggat 303
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 177 cagagcctatgtggtcctggcatt-cctatgtagaccaggttggcctctagctcagggat 119
Query: 304 ccccctgtctctacctcccaggtgctggggttaaaggcatgtaaggtgctcacctcctcg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 118 ccccctgtctctacctcccaggtgctggggttaaaggcatgtaaggtgctcacctccacg 59
Query: 364 catggctaggaacctgttagcatatttgaaatcaagaccaagtggaagagactca 418
| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 cctggctaggaacctgttagcatatttgaaatcaagaccaagtggaagagactca 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space: 422400
Effective search space used: 422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_d03.g1 MSMg01no080_d03.g1 CHROMAT_FILE:
MSMg01no080_d03.g1 PHD_FILE: MSMg01no080_d03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:01 2005
(375 letters)
>mm_chr5_75868009_75868783
Length = 775
Score = 687 bits (355), Expect = 0.0
Identities = 370/375 (98%)
Strand = Plus / Plus
Query: 1 actctacaacccagacagatcttgaatgtgtggttttcctgcctcagtctcctgaatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctacaacccagacagatcttgaatgtgtggttttcctgcctcagtctcctgaatggt 260
Query: 61 tgagattacaggcctggtctatgaagccttgacagaaatccctttccctgactcatgcta 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagattacagtcctggtctatgaagccttgacagaaatccctttccctgactcatgcta 320
Query: 121 agtcttactagatcataactgactggcacattattagggtgtgatctttgggatcagcta 180
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 321 agtcttactagatcataactgactggcacgttattggggtgtgatctttgggatcagcta 380
Query: 181 taataccgcagaggttgcagcagagagcccagtcttgctgttttcaagcaagaatttgat 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taataccccagaggttgcagcagagagcccagtcttgctgttttcaagcaagaatttgat 440
Query: 241 gctccgtgggaggcactccaatgggaaggattctgcttaggttcaggccattgagtctgc 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 gctccgtgggaggcactccaatgggaaggattctgcttgggttcaggccattgagtctgc 500
Query: 301 catggaagtcctggagctaatttccccttattattgaacttgaaacagctagggtaaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catggaagtcctggagctaatttccccttattattgaacttgaaacagctagggtaaata 560
Query: 361 aagcagattttaatc 375
|||||||||||||||
Sbjct: 561 aagcagattttaatc 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
