Query= MSMg01no083_k23.b1 MSMg01no083_k23.b1 CHROMAT_FILE:
MSMg01no083_k23.b1 PHD_FILE: MSMg01no083_k23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:29 2005
(593 letters)
>mm_chr5_81385051_81386049
Length = 999
Score = 1038 bits (537), Expect = 0.0
Identities = 579/597 (96%), Gaps = 10/597 (1%)
Strand = Plus / Plus
Query: 5 gaattctggctacttgcgaaagggagagagga-catttggctcatggctctgaaagtcca 63
||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 205 gaattctggatacttgtgaaagggagagaggtgcatttggctcatggctctgaaagtcca 264
Query: 64 caatcaaattcttgtatcccctttgttttgggcttctggaattgagcacatcacatacaa 123
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 265 caatcaaattcttgtatcccctttgttttgggcttctggaatggagcacatcacatataa 324
Query: 124 tacttctcaagccagcaaggagagagagaagagaagggtctaaggcccaatcagcccttg 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tacttctcaagccagcaaggagagagagaagagaagggtctaaggcccaatcagccctta 384
Query: 184 gatggcaggcttccagcccagcatgaagatgatacaactggtctcccctcttatgaaagt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gatggcaggcttccagcccagcatgaagatgatacaactggtctcccctcttatgaaagt 444
Query: 244 tgtatagcagttcctagtgtgctcctcctgaggactgaaactacaaggaatttttgctac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtatagcagttcctagtgtgctcctcctgaggactgaaactacaaggaatttttgctac 504
Query: 304 tgagaataaatcaaggttggtagaacaaagtgagttacacataaaatgatccgacaaaga 363
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 505 tgagaataaatcaaggttggtagaacaaagtgagttacacataacatgatccgacaaaga 564
Query: 364 aactctagccaacagcatcccagaatattgccctatagaaaaaaaaa---ttaagaaatt 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 565 aactctagccaacagcatcccagaatattgccctatagaaaaaaaaaaaattaagaaatt 624
Query: 421 tcttagacaa----gctcaccacctgccttacagtaaaagcagaagagagctctgcatgt 476
|||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 625 tcttagacaaacaagctcaccacctgctttacagtaaaagcagaagagagctctgcatgt 684
Query: 477 tgaactgaaaggatactgatcaacatgaaaacatctggggatgtgataaagcatataatc 536
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 685 tgaactgaaaggatactgatcaacatgaa--catctggggatgtgataaagcatataatc 742
Query: 537 aaataaggagaagtctaatgctgtaatgatgctaaataattcctttcactctaatac 593
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 aaataaggagaagtctaatgctgtaatgatgctaaataattcctttcactctaatac 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 999
Length adjustment: 10
Effective length of query: 583
Effective length of database: 989
Effective search space: 576587
Effective search space used: 576587
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_k23.g1 MSMg01no083_k23.g1 CHROMAT_FILE:
MSMg01no083_k23.g1 PHD_FILE: MSMg01no083_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:29 2005
(251 letters)
>mm_chr5_81477931_81478581
Length = 651
Score = 474 bits (245), Expect = e-138
Identities = 248/249 (99%)
Strand = Plus / Minus
Query: 1 catctaaaaatgaacaattaaaagtataatttttcccattttatgactacaatacaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 catctaaaaatgaacaattaaaagtataatttttcccattttatgactacaatacaattc 390
Query: 61 tcagagataagaactacttcatgataatatgagtgtcttaaggagaggaaggacacctcc 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 389 tcagagataagaactacttcatgataatatgagtgtcttaaggagagggaggacacctcc 330
Query: 121 ctactcatctgcaagcaaggccaagacaaagaattatcaatttactcttacaatatgcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ctactcatctgcaagcaaggccaagacaaagaattatcaatttactcttacaatatgcac 270
Query: 181 ttatgatgtgcctgttatgtgctaagttaaaattcagggaatacatttttaaagagaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ttatgatgtgcctgttatgtgctaagttaaaattcagggaatacatttttaaagagaaag 210
Query: 241 tatttcatg 249
|||||||||
Sbjct: 209 tatttcatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
