GGCGCCGCTATACGACTCCTATATTCCGAGAATCCGCGGAATTCTATCTG
AGCTACAAGGAATCAGTCAGAGTTGATGTTTGAAGCTTTCTGTATTCATG
AAGTTAGGGAAAATATGTGTCTTGAGATAAAAACACAGCTGAGGTTTGGT
TACGGCTAGCTGCCTGGAATCTAAACTCTCTGTTAAGTAGTTAAATAAAC
CCAACATCTGGCTGGCCCTTTATTATTCATTCTGCTTCCTAGGGGGAAAT
ATTGCAAATGAGAAAGCATATGTTGACTTGGGATCATTTCAATAAAAACT
CTTTCTTATGCAAATATTTATCTTAAAATCCTAAAAACTACTAATGAAGG
CAAACATTTTTGAATAGACAATGGAATACTGTTGACACTGGGAATGTGGG
ATGTGGAGAGAGCTAAATTTTCAAGGATAAACCGAGATTCCCCTTTGGGG
ATACTTAAGAGAGTTGCTTATGTTTTTTGAGTCTTACTAAAGTAAATATA
TATTGTTTACAAACATGAAAAAGAAACAACAGCAAACACAAAATTATGTA
AAGATTCAAATAGATAATTTTATTGTAGCTATAGGAAGGCAGCAATTTTT
GCTGAATTTTACTTTCCACAATTATCTTGTTGACTCTAACAGAAGCCATG
GAATAAGTACTGTTTTCTTAATTTGCGGGGAGAAAATTGAACCTAAGGAC
TACTA

AATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTGTGGGCTCTAGTAATGATGGTTGTGGCA
AAGAATTATCAACCTATATTATAGTGGCAAAAATATTATGGGATTAAGTA
CACACATACTGGTTGAATTTAAAGACAGCTCCTCAAAAAATGAAACTCAT
TCCTGATACTATTATTAGTGCAAAGAATGGATAGATAGATAGGTAATCAA
CCCTAGAAGATGTTAATATTCTTCTTCTAAGTGAACATAGAATTGAAGTT
GATCCCAATGATTTATTGCTACATCAATAGATGAGTGCATCTCTCAAAAC
CATAGAAGATGCTTCTTCTTACAGTAGACACAGAGACCCCCAACCAGCCA
ACATACAGAGAAAACTAGGGTGTATGGTGCTCAGCCCTACATGGGACATC
AATATCATACTCCTCCTCCCAGAGCTCAACAATCATGATGGGAACAGATG
CAGAAATATTCCAAGAACGAGAGGTATATAGGTTGACTACAACAAAGTGT
TTTCAGACAGAACAGGCTGAGATACACATCCCTATGCAGGACACACATTA
ATTCACAATTGTGATGATTACGTACACTAAACCAGATAAAATGCAAGACT
GGAAAAAAAAAGATCTCAGCATAGTTGTGTAGGTGAAAATTAAGTAACAC
CTAGAGCCTAGTAGC

Query= MSMg01no086_a20.b1 MSMg01no086_a20.b1 CHROMAT_FILE:
MSMg01no086_a20.b1 PHD_FILE: MSMg01no086_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:37:38 2005
         (615 letters)



>mm_chr5_16188306_16189322
          Length = 1017

 Score = 1147 bits (593), Expect = 0.0
 Identities = 608/615 (98%), Gaps = 6/615 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctatctgagctacaa---ggaatcagtcagagttgatgtttgaagctttctgtat 61
           |||||||||||||||  |||   |||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatctgagc--caaaaaggaatcagtcagagttgatgtttgaagctttctgtat 262

                                                                       
Query: 62  tcatgaagttagggaaaatatgtgtcttgagataaaaacacagctgaggtttggttacgg 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tcatgaagttagggaaaatatgtgtcttgagataaaaacacagctgaggtttggttacgg 322

                                                                       
Query: 122 ctagctgcctggaatctaaactctctgttaagtagttaaataaacccaacatctggctgg 181
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 323 ctagctgcctggaatctaaactctctgttaagtagttaaataagcccaacatctggctgg 382

                                                                       
Query: 182 ccctttattattcattctgcttcctagggggaaatattgcaaatgagaaagcatatgttg 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ccctttattattcattctgcttcctagggggaaatattgcaaatgagaaagcatatgttg 442

                                                                       
Query: 242 acttgggatcatttcaataaaaactctttcttatgcaaatatttatcttaaaatcctaaa 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 acttgggatcatttcaataaaaactctttcttatgcaaatatttatcttaaaatcctaaa 502

                                                                       
Query: 302 aactactaatgaaggcaaacatttttgaatagacaatggaatactgttgacactgggaat 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aactactaatgaaggcaaacatttttgaatagacaatggaatactgttgacactgggaat 562

                                                                       
Query: 362 gtgggatgtggagagagctaaattttcaaggataaaccgagattcccctttggggatact 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gtgggatgtggagagagctaaattttcaaggataaaccgagattcccctttggggatact 622

                                                                       
Query: 422 taagagagttgcttatgtttttt-gagtcttactaaagtaaatatatattgtttacaaac 480
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 623 taagagagttgcttatgtttttttgagtcttactaaagtaaatatatattgtttacaaac 682

                                                                       
Query: 481 atgaaaaagaaacaacagcaaacacaaaattatgtaaagattcaaatagataattttatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 atgaaaaagaaacaacagcaaacacaaaattatgtaaagattcaaatagataattttatt 742

                                                                       
Query: 541 gtagctataggaaggcagcaatttttgctgaattttactttccacaattatcttgttgac 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gtagctataggaaggcagcaatttttgctgaattttactttccacaattatcttgttgac 802

                          
Query: 601 tctaacagaagccat 615
           |||||||||||||||
Sbjct: 803 tctaacagaagccat 817


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1017
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1007
Effective search space:   609235
Effective search space used:   609235
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)