Query= MSMg01no086_j02.b1 MSMg01no086_j02.b1 CHROMAT_FILE:
MSMg01no086_j02.b1 PHD_FILE: MSMg01no086_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:21 2005
(452 letters)
>mm_chr5_62479905_62480755
Length = 851
Score = 828 bits (428), Expect = 0.0
Identities = 443/448 (98%), Gaps = 1/448 (0%)
Strand = Plus / Minus
Query: 5 gaattctagaaggctttctaactcacctaacaaattaaaatgaatattatgtaaagtaat 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gaattctagaaggctttataactcacctaacaaattaaaatgaatattatgtaaagtaat 592
Query: 65 atttatattgacaaaccagatataatattagctacagaacgtatacttttagatataata 124
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 atttatattgacaaagtagatataatattagctacagaacgtatacttttagatataata 532
Query: 125 gattaggattctatagagtaagtaaataacacaataaattattaaattacatcgagaaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 531 gattaggattctatagagtaagtaaataacacaataaattattaaattacatcgaaaaat 472
Query: 185 ataattgtgttgatgaactacacaatcagttatgtattatatacagcatcctctgtatca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ataattgtgttgatgaactacacaatcagttatgtattatatacagcatcctctgtatca 412
Query: 245 ttctatttcaggaactactcagatgacaggcaagttaattgactaatatttacagaagaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ttctatttcaggaactactcagatgacaggcaagttaattgactaatatttacagaagaa 352
Query: 305 ctgaagcttagagtcatctttctgatggcttcacagctaaacttatttaaaattctctca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ctgaagcttagagtcatctttctgatggcttcacagctaaacttatttaaaattctctca 292
Query: 365 atactgaaaattcacctgttatatgtgtttcatattaaagttctttgagtatatagaact 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 atactgaaaattcacctgttatatgtgtttcatattaaagttctttgagtatatagaact 232
Query: 425 tttctttttgagtttgagttcctttctt 452
||| ||||||||||||||||||||||||
Sbjct: 231 ttt-tttttgagtttgagttcctttctt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 851
Length adjustment: 10
Effective length of query: 442
Effective length of database: 841
Effective search space: 371722
Effective search space used: 371722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no086_j02.g1 MSMg01no086_j02.g1 CHROMAT_FILE:
MSMg01no086_j02.g1 PHD_FILE: MSMg01no086_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:22 2005
(354 letters)
>mm_chr5_62353335_62354088
Length = 754
Score = 669 bits (346), Expect = 0.0
Identities = 352/354 (99%)
Strand = Plus / Plus
Query: 1 taagaaaatatgtaaacaagactatgtgaatgacaagaattgcagtaagtgcgattattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taagaaaatatgtaaacaagactatgtgaatgacaagaattgcagtaagtgcgattattg 260
Query: 61 aatcattagacatataccataaatgttaaagaatttattatgcctgaagtaattgagtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatcattagacatataccataaatgttaaagaatttattatgcctgaagtaattgagtag 320
Query: 121 ggttatatcatccaataaactccggatgatacaatatttttcaaaacaaatagttttatt 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggttatatcatccaataaactccagatgatacaatatttttcaaaacaaatagttttatt 380
Query: 181 agactaagttaatacaaaaactttattttattttagatggcaaataaacaatgtagttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agactaagttaatacaaaaactttattttattttagatggcaaataaacaatgtagttgt 440
Query: 241 ctgacgaatcttttgtaaggatgatgaacatactggctctttgtgttggagttatgtggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgacgaatcttttgtaaggatgatgaacatactggctctttgtgttggagttatgtggg 500
Query: 301 atcctcatatggaacattctattaggttttaagcaggcagtatcaaaagtagct 354
| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcctcatatggaacattctattaggttttaagcaggcagtatcaaaagtagct 554
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
