Query= MSMg01no092_k14.b1 MSMg01no092_k14.b1 CHROMAT_FILE:
MSMg01no092_k14.b1 PHD_FILE: MSMg01no092_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:35 2005
(231 letters)
>mm_chr5_82270588_82271218
Length = 631
Score = 366 bits (189), Expect = e-106
Identities = 210/227 (92%), Gaps = 16/227 (7%)
Strand = Plus / Minus
Query: 5 gaattcatgccatacctgtatgtactcagaaaggaaagaaataggctgaatccctaactc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gaattcatgccatacttgtatgtactcagaaaggaaagaaataggctgaatccctaactc 295
Query: 65 ttggcatactacatttaatgatgtgtatttctggtttattagggtatagatgaatctaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ttggcatactacatttaatgatgtgtatttctggtttattagggtatagatgaatctaag 235
Query: 125 aggcttaaaaccttggcctggtagaactaatatttatttatttatttatttatttattta 184
|||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 234 aggcttaaaaccttggcctggtagaactaa----------------tatttatttattta 191
Query: 185 tttatttatttatttatttatttttattggttattttatttatttac 231
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tttatttatttatttatttatttttattggttattttatttatttac 144
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 10
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no092_k14.g1 MSMg01no092_k14.g1 CHROMAT_FILE:
MSMg01no092_k14.g1 PHD_FILE: MSMg01no092_k14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:35 2005
(279 letters)
>mm_chr5_82122473_82123151
Length = 679
Score = 524 bits (271), Expect = e-153
Identities = 277/279 (99%)
Strand = Plus / Plus
Query: 1 agtaataaagtgtatttggctgatcctgtggtatttactgttaaacacatcaaggtaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtaataaagtgtatttggctgatcctgtggtatttactgttaaacacatcaaggtaaga 260
Query: 61 aaatgtcatggcctgtttcattgtccatattatttatatttgttatggatgaatattaaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 aaatgtcatggcctgtttcattgtccatattatttatatttgttatggatgattattaaa 320
Query: 121 tatattaattttcttttaatatttatctattatgtaacatagactatatcattaatgagt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 tatattaattttcttttaatatttatctattatgtaacatagactatatcatcaatgagt 380
Query: 181 acagtcatggttgttttcagaaatattcataaatatgccatagaaaatatataatatctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagtcatggttgttttcagaaatattcataaatatgccatagaaaatatataatatctg 440
Query: 241 tctttatatgaaatgatatgttaatttttccatatagaa 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctttatatgaaatgatatgttaatttttccatatagaa 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
