BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-093C23.T7 (MSMg01no093_c23.b1) | MSMg01-093C23.TJ (MSMg01no093_c23.g1) |
ACC | AG310693 | AG310694 |
length | 1,409 | 1,311 |
length of high quality (start - end) | 39 (21 - 59) | 208 (117 - 324) |
definition | CHROMAT_FILE: MSMg01no093_c23.b1 PHD_FILE: MSMg01no093_c23.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:47:28 2005 | CHROMAT_FILE: MSMg01no093_c23.g1 PHD_FILE: MSMg01no093_c23.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:47:28 2005 |
singlet/doublet | --- | singlet |
---|
BLAST hit | no hit data | unique |
---|
sequence | TATTGGGCGCTATAGACTACTATAGGGAGAGGATCCGCGGAATTCATCTT
CATCTTTTCTCCATTTAAGATTTTCCTGTTACCTTCTCTGTCTCACTCTG
CCTTTAAGTTCTCCACCCATTTCTACTTCCTCACACTTCAACCCAAACGA
GTCTCAAAAGTCAATTTCTACTTCCCTACCTGTACTTTCCTCTGGAGTTC
TCCCGTTTGTGGGGTTTGGTGGTGACGACCGATTTAATTTACTTTTTCTT
TAACTTTCCTATACCATTTCAACTTTCTCTATTTCCTTTTCCTTTCTTTT
CCTTTTTTATTTTTTTTTATTTCTTTCTTCAATTTTATTTTTTTTTCTTT
ATACTTTCTTATTTCTCACCTTCACTCCTTATTTTTTTTTTTACATTAAT
CCTTCTTTTATTTTTTTTTTTTCCATATTTTTCCCCTCCTTTTTTTTCCC
CCCCCCCCTTTTTTTCTCTTTTTTCCTTTCTAAAAAAAAATATGTTTATT
TCTCTCTCTCATTTATCTTTTTCTTTTCTCTTTTCTATCTTTTTTTTTTC
TTCTACTTATTCCTTTCTCTTTCTCTTTTTTTCCTTATTTTCTTATTAAC
CTTTTCTCTCTTCTTTCTCTTTTTTTTTTTTTCCTTCTCATTTTTTCTAT
TATCTTCTAATTATTTTTTTTCTTTCTCTTTCTTTTATTATTTTTTTTTA
TTTTTTCTTTTCTTTTTATTTATTATTTTCTTCCTTTATTTCTCTTCATC
TCTATTTCTTATTTTTCTATTTCTCTTTAATTATTCATCTATTTTTTTAT
ATCTATTCAATTATATTTCTTTTTTTACCTATCTTCTTTTAATCCTATTT
AATTTTTTTTTCTTCCCCTTTTCTTTTTTTCTTCTTTTTCTTTCACTTTT
CTTCTTTTCTTTCATTATTTTTTTTTACTTTTCTTTTTTCTTCATCTTTA
TTTTTATATTTTTTTATTTTCTTTAACTTCTTTTCATCTTTTTTTTCTTT
TCTTTCATTTATTATTCTTATTTTTTTATTGTTATTCTCATTTTTTTACT
TTATTATCTCCTTTATTATATTACTTTTTTTCTTAATTTATTTTCTCTCC
ATGTTTCTATCTATATTTTTACCCTTCTATCTTCTACTCTCTTACCAACC
TCTATAATTTTCTTCATCTTATTTCTATTTTATATCTTTCATCTCTACTA
TTATTCCTTGCATCTTTTTACTTCTATTTTATTTTTTCTTTATCTTTCTT
TTTCTCATATCCTATTCTTCCTTTATTCTTCTCTTTATCCTGCTATCTAT
TGGTATTTTTTTTCTATATTCCTACTCACTACTTTTTTTATTATTTTTAT
TTTATTATCTCTTTCTTTTCTTTATACTGTTTCATTATATTTTGCTCTTT
TTACTTCAT
| TTATCACATTGGAGGCTGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCCCTTTAAAGTAAGGAGAGTTGCTTTCTTATCTTG
TGTGTCCCCCTTCTTTACTATGCCCGAGGAAGGTTTAACAACCTCAGTTT
GTTTTGACACTTACCCAAGGTCTGTCATGCCCTGAACCACAGGCTTGAGA
AGTGACATATGGTGGCCACAGGGATGCATGTTAGATGTTCCTAAACCTTT
GACACATCCTTTCTGGCTTCTCTTCTGTTGTCCTCTGTGGCAAGACAGGC
CATCGTCTCAGCTTTAGTTTAGGGTGTTATCTGTGGAGCATAGTGATACT
GGAATGTGTTCACCCATTTTCCCGTTCCTAATCAAATAAATACTATTTTT
TTTTTTTGTGCTCCTTATCCTCTGCTCAATTTTATGTGACTCTGTCCCTC
TTTTTTTTTTCCCCCCCCTTCTTTGATCTGTTTATTTTATATAAATATTT
TGGTTCGCATATCCTTCTTTACTTTTCTTCCCTTTATTTCTTTCTATGTT
TTTTTTTTTTTCTGTCAATCTCTTTCTCCTTTTTTCTCCTTGTTTTTTTT
TTCCTTTTTTTTTTTTTTTTCTCCTTTTATTCTGTCTTTTGTTCATTTTT
TTATCTTTTTTCTCTTTTCTCTACTTTTTCTTTCTTTTCCTTTTTTTTCT
TTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTATTTCTCTTCTTATC
TTTTTATACTCTTTTTCTTTTTTTCTTTTTTTTTTTTCCTCCTTTTTTTC
TCTATTCTTTCTTTTTATTTTTTTTCTCTTTTTTTTTTTCCTTCTCTTTC
TTTTTCTAATTTCTTTTCTTTTTTCACCTATTTCTTTTTTTATTCTTCTC
TTTCTTCCTTTTTTTTTTTCTTTCTTTTTTTTCCTCTTCTTCTTTTTTCT
TTCTTTTTTTCTCTTCTTTTTTCTTTACTCTTTTTTTTTTCTTTTCTTTT
TCTCTTTTCCTTTTTCTTTATTCTTCTTTTTTTTTTTTATTTTCTTTCTT
TATTTTTCTTTTTTTTATGCTCCTCTCTCTCTCTTATTTTTCCTCTCTTT
ATTCTCTCTTTTTTCTTTTATTTTTTTCATTTTCTTTTTTTATTACTCTT
CTTTGTTTCTTTCTTTTATCTTTTCTCTTTTTTTTATTTTTGTTCCTTCT
TTTTCTACTTTAATTATCTCTCATCTTTTTTCTTTACTCTTCATTTCTTT
CTCTTTTTTTCTCTCTATATCATCTTTACTTTTATTTCTATATTCTTTTC
CTATCTTTTTA
|
quality values | Open.Hide. 8 8 11 11 10 10 10 10 10 10 10 8 8 8 8 8 8 9 9 9 15 18 30 33 33 33 33 31 31 31 28 30 33 33 36 37 37 37 37 37 29 30 24 37 33 33 33 33 39 41
41 33 33 33 34 37 20 21 11 11 11 11 11 8 8 7 7 7 8 10 17 23 36 40 37 33 33 36 36 36 36 53 48 47 57 48 47 38 36 36 36 31 31 31 31 33 23 23 11 9
11 12 8 8 8 10 8 8 10 10 17 21 21 9 9 8 8 9 18 18 25 29 37 33 28 28 28 36 33 36 33 37 37 34 34 39 39 32 29 19 17 17 18 29 28 35 35 39 32 32
32 35 43 40 47 39 35 35 37 37 35 35 35 37 43 43 33 37 33 30 22 17 10 9 9 9 9 15 21 26 33 33 33 33 33 47 48 57 57 57 48 43 43 43 43 43 36 36 36 42
43 43 43 43 39 36 37 37 28 24 24 18 17 17 20 30 28 27 18 17 17 13 12 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 10
9 9 11 12 10 8 6 6 8 6 6 8 8 6 6 6 6 10 8 9 8 8 8 8 8 6 6 6 6 8 8 10 10 10 10 9 9 8 8 6 6 8 8 8 7 7 10 8 14 16
12 12 12 16 16 14 10 9 9 9 10 9 10 9 9 9 8 8 8 8 8 8 10 10 12 11 13 10 10 9 9 9 9 8 8 8 8 8 8 8 10 10 10 8 8 8 8 8 10 10
8 8 8 9 8 8 8 8 8 8 10 10 10 8 8 6 6 8 6 8 8 8 6 7 8 8 10 9 9 9 9 9 10 9 8 8 21 21 19 11 8 6 6 6 6 8 8 9 10 8
8 8 8 8 8 8 8 10 10 11 11 8 8 8 13 15 15 18 10 13 10 8 8 8 8 11 8 8 8 10 10 9 9 8 8 8 8 8 8 8 15 19 9 8 8 8 8 8 8 9
9 17 17 12 11 8 8 8 8 8 10 15 20 8 8 8 8 8 9 15 15 11 11 11 10 10 15 12 9 9 9 10 8 9 11 12 10 8 8 6 7 10 8 9 9 8 8 8 8 8
8 10 8 10 8 8 8 10 12 8 8 8 11 8 8 8 8 8 8 9 10 11 8 8 11 15 20 12 12 10 10 10 8 8 8 8 8 8 8 12 17 12 12 10 8 8 8 8 6 6
8 6 6 8 8 8 8 8 8 8 8 9 9 9 10 10 10 10 11 10 12 11 14 8 8 8 10 10 10 10 13 9 9 9 10 9 8 8 8 8 8 10 10 8 6 6 8 8 9 9
9 9 9 9 9 9 8 8 6 6 8 8 10 9 10 8 8 6 6 8 8 8 8 8 10 8 12 10 10 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8
6 6 8 8 10 10 9 8 10 10 8 8 8 9 10 11 10 9 10 10 9 9 9 12 10 10 8 10 10 13 13 10 8 8 10 8 8 8 6 6 8 10 16 10 12 13 16 18 9 9
9 11 11 11 12 12 11 11 10 8 8 7 7 10 11 11 10 10 8 8 6 6 8 6 6 6 8 12 7 6 6 6 8 8 10 10 8 8 8 8 6 8 6 6 8 8 7 6 8 8
8 8 8 8 8 10 9 9 8 8 12 14 10 10 8 8 8 8 8 8 6 8 6 6 8 8 8 10 8 8 8 10 10 10 10 8 6 6 8 6 6 8 8 11 13 15 11 11 11 10
10 10 10 10 10 8 8 8 8 8 8 8 10 10 8 10 10 11 11 11 15 15 18 10 10 8 8 8 8 11 11 10 9 8 8 8 8 8 8 8 8 6 6 8 8 8 10 10 11 7
7 7 7 12 11 14 15 17 15 15 12 11 12 20 16 11 10 10 12 14 12 18 12 15 10 7 8 8 8 8 7 7 11 11 28 17 17 17 15 9 9 11 12 8 6 6 10 8 9 10
13 13 12 11 11 9 10 12 7 6 6 8 10 10 8 8 8 8 8 8 10 12 12 12 10 8 6 6 8 10 13 8 8 8 8 11 13 12 10 10 8 10 8 9 10 10 10 11 8 8
8 8 8 13 8 8 8 8 8 10 11 22 9 9 9 11 11 17 10 8 6 6 8 8 8 8 8 22 15 12 10 10 10 8 8 8 8 8 8 15 11 13 9 9 9 8 10 10 8 8
8 13 10 10 8 8 6 6 8 8 9 9 11 8 8 7 7 10 8 8 8 9 9 13 13 13 10 10 10 9 9 9 10 9 8 8 8 8 7 8 9 10 12 12 8 10 8 8 11 8
9 9 9 9 9 8 10 8 10 8 8 8 10 8 6 8 6 6 8 6 6 8 8 6 6 8 8 12 10 13 13 23 15 11 9 9 9 13 10 9 9 10 9 8 8 8 6 8 8 8
9 9 9 6 10 7 8 8 8 8 8 8 8 8 8 9 11 11 8 10 8 8 8 8 11 8 10 8 8 8 10 8 8 8 14 11 11 9 10 10 8 8 6 6 8 8 11 10 9 8
6 8 8 8 8 8 8 8 8 10 8 10 12 10 11 11 10 10 8 8 8 8 8 8 9 9 12 12 12 12 8 10 10 12 12 14 12 13 15 10 10 9 9 7 6 8 8 11 8 6
8 6 6 6 6 8 8 10 8 8 9 9 12 16 10 10 8 8 8 8 8 8 9 9 9 9 9 10 11 9 9 10 11 14 12 8 8 8 8 8 8 8 8 7 7 13 7 6 6 8
9 10 10 8 8 6 6 8 6 6 8 6 6 8 8 11 10 8 8 8 6 6 8 6 6 8 6 6 8 10 8 8 8 8 10 10 9 8 8 6 6 8 8 8 8 8 8 8 10 10
8 8 6 6 6 8 8 9 9 12 9 8 6 6 6 6 6 8 8 8 8 8 8 8 8 10 10 8 8 6 6 6 8 13 17 17 13 12 10 8 8 8 8 8 10 8 10 8 8 8
8 8 7 6 10 8 13 8 9 9 12 15 12 6 6 6 8 8 11 12 12 8 8 8 8 8 8 8 7 7 10 8 8 8 8 8 8 6 6 8 8 10 9 9 7 8 8 8 9 9
12 11 9 8 8 10 8 8 8 | Open.Hide. 7 8 8 8 7 7 7 6 6 6 6 6 6 6 6 8 6 6 6 6 9 9 15 8 8 8 8 8 10 19 29 15 14 10 10 10 17 19 29 17 17 17 31 29 30 28 33 33 35 34
34 28 28 30 39 37 37 37 37 37 37 41 27 23 9 7 8 8 13 8 8 10 10 13 10 20 20 33 36 43 40 43 43 48 48 50 42 43 37 42 36 42 42 38 53 53 47 37 37 39
37 37 41 27 23 9 12 12 12 12 11 13 16 12 13 16 22 25 28 30 21 19 12 12 11 11 20 25 47 47 47 47 48 33 36 36 36 36 42 48 42 43 39 43 39 39 36 36 44 43
57 57 48 59 59 43 43 43 43 40 43 43 42 43 43 43 35 35 36 35 30 39 37 37 39 34 26 20 23 18 19 27 30 34 34 34 39 32 37 32 28 28 32 28 39 36 39 28 28 28
33 33 43 47 43 43 43 43 44 40 37 28 28 28 31 31 32 37 37 37 37 32 32 43 44 42 43 43 43 46 36 36 25 25 25 41 32 44 43 43 43 42 42 33 30 31 42 37 44 42
44 42 28 28 23 23 23 36 44 57 57 57 59 59 47 35 35 35 44 44 54 54 48 48 44 44 44 43 47 47 39 35 42 42 32 21 10 10 10 10 18 18 28 31 32 35 28 27 18 17
17 25 30 32 31 30 30 37 40 37 35 35 39 43 37 28 28 25 34 28 18 13 12 11 10 11 11 14 19 20 17 26 23 18 18 14 14 21 12 8 8 8 10 12 28 24 24 23 15 15
12 9 10 10 10 9 12 18 27 19 18 14 14 14 28 14 17 19 30 31 19 14 14 12 24 23 24 24 16 12 10 12 12 14 11 12 12 19 15 14 14 21 26 34 22 18 11 10 10 10
9 17 12 14 19 19 25 11 11 9 11 11 22 22 30 20 20 10 10 10 11 13 17 12 12 11 9 9 11 12 8 10 10 10 10 12 9 8 8 10 8 8 8 15 15 10 9 9 9 8
8 9 9 9 10 12 9 10 12 12 15 10 10 13 10 10 9 10 8 8 8 8 8 8 8 8 8 8 8 8 6 8 8 8 8 8 8 8 8 8 9 10 10 8 8 8 8 8 6 8
7 6 8 8 15 15 13 10 10 8 8 8 8 8 8 8 11 10 13 10 9 9 11 14 14 11 9 9 10 11 12 12 13 16 9 9 9 10 10 8 8 8 8 6 6 8 8 10 8 10
9 9 14 13 9 8 10 9 8 13 12 8 8 8 6 6 8 8 8 10 10 15 8 8 8 8 6 6 8 10 12 11 11 11 13 13 7 6 8 8 10 10 11 11 18 21 21 15 10 6
6 6 6 8 10 8 10 11 16 19 22 21 18 11 10 10 14 13 15 10 8 8 8 6 7 10 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 8 6 6 10 10 14 13
13 11 8 8 7 6 10 8 10 8 8 8 8 8 8 8 8 8 8 8 6 6 6 8 8 9 8 8 12 8 10 15 29 33 21 18 12 12 10 12 13 13 10 13 13 13 10 9 9 9
13 11 12 12 15 12 14 10 10 10 8 8 8 10 13 10 9 9 9 15 10 10 9 9 9 14 9 11 12 13 14 9 10 10 9 9 8 10 7 9 8 8 8 15 13 11 8 9 9 11
11 13 12 10 8 8 8 8 6 6 8 8 14 12 8 8 6 6 12 12 16 16 10 10 9 9 10 10 12 16 10 8 8 8 8 11 19 8 8 8 9 9 8 12 9 10 11 11 8 8
9 15 12 9 8 15 15 16 12 10 10 8 8 8 8 8 8 8 8 10 15 12 9 8 8 9 9 15 11 10 10 10 17 14 16 24 15 12 8 8 6 7 8 8 10 10 13 13 14 17
26 15 12 11 10 9 8 8 8 8 10 8 8 8 12 8 9 9 11 8 10 8 9 10 9 10 9 8 8 7 8 8 8 14 15 16 18 22 18 18 9 9 8 8 8 8 8 8 8 8
8 8 6 9 9 12 12 9 9 13 12 9 9 12 12 20 8 8 6 6 8 8 8 8 8 8 14 13 19 7 7 8 8 8 8 8 8 12 7 7 8 8 10 10 10 10 12 11 9 7
11 7 8 10 10 8 8 6 8 6 6 8 6 6 8 8 9 10 10 9 9 9 9 11 11 9 9 9 11 12 16 26 19 12 10 10 10 10 18 9 11 12 12 15 12 21 18 24 19 12
12 12 11 11 11 13 11 9 9 9 9 10 8 8 8 8 8 8 8 8 8 8 8 6 7 8 10 10 8 10 12 11 10 13 13 13 10 9 9 9 9 9 9 11 10 8 8 8 8 8
7 6 10 10 18 10 8 6 6 8 12 19 16 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 6 6 8 6 9 10 12 12 8 8 6 6 6 6 10 8 8 8
10 8 8 10 8 10 8 8 9 16 10 12 10 10 10 10 9 8 8 8 8 10 12 15 12 13 10 9 9 11 17 12 12 10 10 10 10 12 11 10 8 6 6 6 6 8 8 6 6 8
8 10 13 9 9 9 12 8 10 8 8 10 8 8 8 9 11 13 10 10 10 11 15 15 17 10 10 10 13 16 26 22 14 10 9 10 10 16 11 11 9 9 8 8 8 6 7 6 6 6
10 10 14 12 13 9 6 6 6 7 6 6 8 8 6 7 10 6 8 8 8 8 8 6 6 6 12 10 12 8 9 9 8 8 6 6 8 7 6 8 10 8 9 8 8 8 8 6 8 8
8 8 8 9 15 12 12 21 14 12 8 8 8 8 8 10 10 10 8 8 8 8 8 8 12 12 9 9 9 11 12 13 10 10 8 8 8 8 8 8 8 8 8 10 6 6 8 8 12 10
11 9 9 9 11 9 13 21 19 13 13 |