Query= MSMg01no094_g15.b1 MSMg01no094_g15.b1 CHROMAT_FILE:
MSMg01no094_g15.b1 PHD_FILE: MSMg01no094_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:03 2005
(241 letters)
>mm_chr5_115114785_115115425
Length = 641
Score = 354 bits (183), Expect = e-102
Identities = 228/251 (90%), Gaps = 13/251 (5%)
Strand = Plus / Plus
Query: 4 ggaattctccctgtttccgaaacctgaggccaggtggggtggaagcccg----------- 52
||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 191 ggaattctccctggggcagaaacctgaggccaggtggggtggaagcccgtctcctcaaat 250
Query: 53 --ccgttaccatgggcacagccacttgcccgacttagccgctgggtgtgatgccattcct 110
||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||
Sbjct: 251 gaccgttaccatgggcacagccatttgcagggcttagccgctgggtgtgatgccattcct 310
Query: 111 ctgggcagctggcctggcagcctgcgggtgtggcccagccgcagctggccaggggacact 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ctgggcagctggcctggcagcctgcgggtgtggcccagccgcagctggccaggggacact 370
Query: 171 tcagagacagcgcagggagggactttaggggttcttaactggggtcccgggttggctgct 230
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tcagagatggcgcagggagggactttaggggttcttaactggggtcccgggttggctgct 430
Query: 231 ggtgtggatgt 241
|||||||||||
Sbjct: 431 ggtgtggatgt 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no094_g15.g1 MSMg01no094_g15.g1 CHROMAT_FILE:
MSMg01no094_g15.g1 PHD_FILE: MSMg01no094_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:03 2005
(127 letters)
>mm_chr5_115225908_115226434
Length = 527
Score = 246 bits (127), Expect = 5e-70
Identities = 127/127 (100%)
Strand = Plus / Minus
Query: 1 aaaccaagaaacccaaacaaatgaaataagaattcatattaatgcaaagattcttcacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aaaccaagaaacccaaacaaatgaaataagaattcatattaatgcaaagattcttcacca 268
Query: 61 cggctctaactaacattggagtctgataacactcagtggtgggtgagtggctgccttgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cggctctaactaacattggagtctgataacactcagtggtgggtgagtggctgccttgaa 208
Query: 121 cactgta 127
|||||||
Sbjct: 207 cactgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 127
Length of database: 527
Length adjustment: 8
Effective length of query: 119
Effective length of database: 519
Effective search space: 61761
Effective search space used: 61761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
